Bacterial Stranded Transcriptome Sequencing and Analysis Test
Short Name: Bacterial Transcriptome Seq
Also known as: Bacterial RNA Sequencing, Transcriptome Profiling
Bacterial Stranded Transcriptome Sequencing and Analysis Test test available at DNA Labs India for ₹28,000. Uses Next-Generation Sequencing (NGS), RNA-seq on Clinical specimen (e.g., blood, sputum, swab, tissue) samples. Results in Reports are typically delivered within 8 weeks after sample collection.. Free home collection in 300+ cities across India.
🩺 Medically Reviewed By
Dr Kothari Ramesh Shantilal
Consultant Microbiologist · Reg: 27670
Last reviewed: September 7, 2026
Overview
The primary purpose of bacterial stranded transcriptome sequencing is to identify and characterize bacterial pathogens at the molecular level, focusing on gene expression. It helps in: 1) Accurate identification of bacterial species and strains, 2) Detection of virulence factors and pathogenicity islands, 3) Analysis of antibiotic resistance gene expression, 4) Understanding host-pathogen interactions, 5) Guiding targeted therapy and infection control measures.
- Test Code
- 6419
- CPT Code
- N/A
- ICD Code
- N/A
- Price
- ₹28,000
- Sample Type
- Clinical specimen (e.g., blood, sputum, swab, tissue)
- Result Time
- Reports are typically delivered within 8 weeks after sample collection.
- Fasting Required
- No
- Method
- Next-Generation Sequencing (NGS), RNA-seq
Sample Collection
No special preparation is required. Inform your healthcare provider about any antibiotics you are taking, as they may affect bacterial RNA expression.
Method: Healthcare professional collection
Laboratory Analysis
Sample collection is performed by a trained professional using sterile techniques. The procedure is generally safe and minimally invasive.
Report Delivery
No specific aftercare is needed. You can resume normal activities immediately.
Timeline: Reports are typically delivered within 8 weeks after sample collection.
Patient Instructions
About This Test
Who Should Get This Test
The primary purpose of bacterial stranded transcriptome sequencing is to identify and characterize bacterial pathogens at the molecular level, focusing on gene expression. It helps in: 1) Accurate identification of bacterial species and strains, 2) Detection of virulence factors and pathogenicity islands, 3) Analysis of antibiotic resistance gene expression, 4) Understanding host-pathogen interactions, 5) Guiding targeted therapy and infection control measures.
How to Prepare
- Ensure the sample is collected in a sterile container
- Transport the sample to the laboratory as soon as possible
- Maintain appropriate temperature (e.g., refrigerate if delay expected)
- Avoid contamination by following aseptic techniques
Doctor's Notes
Reviewed by Dr Kothari Ramesh Shantilal — MBBS, MD (Microbiology) · Reg. No. 27670
"Bacterial transcriptome sequencing provides a comprehensive view of gene expression, aiding in precise strain identification and understanding of pathogenicity. This advanced test supports targeted therapy and antimicrobial stewardship."
Last medically reviewed: September 7, 2026
Test Parameters & Specifications
Sample Stability
- Sample with visible contamination
- Insufficient quantity
- Improper labeling
- Hemolyzed blood samples
- Sample not stored at appropriate temperature
Understanding Your Results
Specific bacterial species identified
Confirms the causative pathogen, guiding targeted therapy
High expression of virulence genes
Indicates potential for severe disease; may require aggressive treatment
Expression of antibiotic resistance genes
Suggests resistance to certain antibiotics; alternative therapy needed
Presence of pathogenicity islands
Indicates enhanced pathogenic potential
Consult your healthcare provider if you have persistent symptoms of infection, if initial treatments have failed, or if you have been advised this test for further evaluation.
Limitations
- ⚠Requires high-quality RNA; degraded samples may yield poor results
- ⚠May not detect low-abundance transcripts
- ⚠Interpretation requires specialized expertise
- ⚠Not a routine diagnostic test; reserved for complex cases
- ⚠Cost may be prohibitive for some patients
Risks & Considerations
- ●Minimal risk of bleeding or infection at the collection site
- ●Rare possibility of fainting during blood draw
- ●No significant risks associated with the test itself
Interfering Factors
- ●RNA degradation due to improper sample handling
- ●Contamination with host RNA
- ●Low bacterial load in sample
- ●Inhibitors in the sample affecting sequencing
- ●Bioinformatics pipeline variations
Compare With Similar Tests
| Test | Bacterial Stranded Transcriptome Sequencing and Analysis | Bacterial Culture and Sensitivity | 16S rRNA Gene Sequencing | Whole Genome Sequencing (WGS) |
|---|---|---|---|---|
| Comparison | Bacterial Stranded Transcriptome Sequencing and Analysis |
Frequently Asked Questions
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Reference Laboratory Services
We serve as a reference laboratory for hospitals and clinics across India. Send samples from your facility with same-day pickup, priority processing, and results delivered through our online portal. Competitive institutional pricing available.
Your Data Privacy
Your medical data is protected under Indian law.
✓ Stored in India: All patient records are stored on servers located in India. No data is transferred outside the country.
✓ DPDP Act Compliant: Under the Digital Personal Data Protection Act 2023, you can request deletion of your records at any time by contacting support.
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