ddRAD Sequencing Primary Data Analysis-96 Samples Test
Short Name: ddRAD Seq Analysis (96)
Also known as: ddRAD-seq Analysis, Double Digest RAD Sequencing Analysis
ddRAD Sequencing Primary Data Analysis-96 Samples Test test available at DNA Labs India for ₹125,000. Uses ddRAD Sequencing, Primary Data Analysis on Extracted DNA samples. Results in Reports are delivered within 4 weeks from sample receipt.. Free home collection in 300+ cities across India.
🩺 Medically Reviewed By
Dr Pasupathy Arumugam
Consultant Pathologist · Reg: 21521
Last reviewed: September 7, 2026
Overview
The purpose of ddRAD sequencing primary data analysis is to process raw sequencing data from 96 samples to identify genetic variants (SNPs) that can be used for various applications such as population structure analysis, linkage mapping, association studies, and marker-assisted selection. This analysis is crucial for ensuring data quality and accuracy before downstream interpretation.
- Test Code
- 6399
- CPT Code
- 81479
- ICD Code
- Z01.89
- Price
- ₹125,000
- Sample Type
- Extracted DNA
- Result Time
- Reports are delivered within 4 weeks from sample receipt.
- Fasting Required
- No
- Method
- ddRAD Sequencing, Primary Data Analysis
Sample Collection
No specific preparation required. Ensure the sample is collected in a sterile container and transported at appropriate temperature.
Method: Blood or tissue sample for DNA extraction
Laboratory Analysis
Sample collection should be performed by trained personnel to avoid contamination.
Report Delivery
The sample should be labeled properly and sent to the laboratory within 24 hours if stored at 2-8°C, or within 1 week if frozen at -20°C.
Timeline: Reports are delivered within 4 weeks from sample receipt.
Patient Instructions
About This Test
Who Should Get This Test
The purpose of ddRAD sequencing primary data analysis is to process raw sequencing data from 96 samples to identify genetic variants (SNPs) that can be used for various applications such as population structure analysis, linkage mapping, association studies, and marker-assisted selection. This analysis is crucial for ensuring data quality and accuracy before downstream interpretation.
How to Prepare
- Use sterile collection tubes
- Label the tube with patient ID and date
- Store at 2-8°C for short-term, -20°C for long-term
- Avoid repeated freeze-thaw cycles
Doctor's Notes
Reviewed by Dr Pasupathy Arumugam — MBBS, MD (Pathology) · Reg. No. 21521
"ddRAD sequencing is a cost-effective method for genome-wide marker discovery. Primary data analysis ensures high-quality variant calling for downstream applications."
Last medically reviewed: September 7, 2026
Test Parameters & Specifications
Sample Stability
- Hemolyzed blood samples
- Insufficient DNA quantity (< 500 ng)
- DNA degradation (high molecular weight smear on gel)
- Improper labeling
- Sample received after prolonged storage at room temperature
Understanding Your Results
If you are using this test for clinical diagnosis, consult a genetic counselor or physician to understand the implications of the results.
Limitations
- ⚠Reduced genome coverage compared to whole-genome sequencing
- ⚠Requires high-quality reference genome for alignment
- ⚠May miss variants in repetitive regions
- ⚠Bioinformatics expertise required for interpretation
- ⚠Not suitable for detecting large structural variants
Risks & Considerations
- ●No significant risks associated with sample collection
- ●Possible bruising at blood draw site
- ●Rare infection at venipuncture site
Interfering Factors
- ●Low DNA quality or quantity
- ●Contamination with foreign DNA
- ●Degraded DNA samples
- ●Incomplete restriction digestion
- ●PCR duplicates
- ●Sequencing errors
Compare With Similar Tests
| Test | ddRAD Sequencing Primary Data Analysis-96 Samples | Whole Genome Sequencing | ddRAD Sequencing |
|---|---|---|---|
| Comparison | ddRAD Sequencing Primary Data Analysis-96 Samples |
Frequently Asked Questions
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We serve as a reference laboratory for hospitals and clinics across India. Send samples from your facility with same-day pickup, priority processing, and results delivered through our online portal. Competitive institutional pricing available.
Your Data Privacy
Your medical data is protected under Indian law.
✓ Stored in India: All patient records are stored on servers located in India. No data is transferred outside the country.
✓ DPDP Act Compliant: Under the Digital Personal Data Protection Act 2023, you can request deletion of your records at any time by contacting support.
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