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ENO3 Gene Glycogen storage disease type 13 NGS Genetic Test

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ENO3 Gene Glycogen storage disease type 13 NGS Genetic Test

Short Name: ENO3 GSD13 NGS Test

Also known as: ENO3 Gene Mutation Analysis, GSD13 Genetic Test, Enolase 3 Deficiency Test, Glycogen Storage Disease Type XIII DNA Test, ENO3 NGS Sequencing Test

ENO3 Gene Glycogen storage disease type 13 NGS Genetic Test test available at DNA Labs India for ₹20,000. Uses Next-Generation Sequencing (NGS), Bioinformatics Analysis, Sanger Confirmation (if required) on Blood or Extracted DNA or One drop Blood on FTA Card samples. Results in Results are typically available within 3 to 4 weeks from the date of sample receipt at the laboratory. In some cases, additional confirmatory testing (such as Sanger sequencing for variant confirmation) may extend the turnaround time. Patients will be notified once the report is ready.. Free home collection in 300+ cities across India.

NGS Genetic TestUnisexAll Ages🏠 Home Collection

🩺 Medically Reviewed By

Overview

The purpose of the ENO3 Gene Glycogen Storage Disease Type 13 NGS Genetic Test is to identify pathogenic mutations in the ENO3 gene that cause glycogen storage disease type 13. This test aids in confirming a clinical diagnosis of GSD13, differentiating it from other glycogen storage diseases, enabling carrier identification in family members, guiding treatment and dietary management strategies, informing genetic counselling for family planning decisions, and facilitating prenatal or preimplantation genetic diagnosis where applicable.

Test Code
2030
CPT Code
81479
ICD Code
E74.0
Price
₹20,000
Sample Type
Blood or Extracted DNA or One drop Blood on FTA Card
Result Time
Results are typically available within 3 to 4 weeks from the date of sample receipt at the laboratory. In some cases, additional confirmatory testing (such as Sanger sequencing for variant confirmation) may extend the turnaround time. Patients will be notified once the report is ready.
Fasting Required
No
Method
Next-Generation Sequencing (NGS), Bioinformatics Analysis, Sanger Confirmation (if required)
Step 1

Sample Collection

A genetic counselling session is recommended before sample collection to document the clinical history of the patient and to draw a pedigree chart of family members affected with glycogen storage disease type 13. No fasting is required. Ensure the patient has not received a blood transfusion within the past 4 weeks.

Method: Venipuncture / FTA Card Prick

Step 2

Laboratory Analysis

Blood sample (3-5 mL) is collected via venipuncture in an EDTA (lavender top) vacutainer. Alternatively, one drop of blood on an FTA card or previously extracted DNA may be submitted. The sample should be labelled correctly with patient details.

Step 3

Report Delivery

The collected sample should be stored at ambient room temperature and transported to the laboratory within 48 hours. Avoid freezing the sample. Results will be available within 3 to 4 weeks and will be communicated via the online portal, email, or WhatsApp.

Timeline: Results are typically available within 3 to 4 weeks from the date of sample receipt at the laboratory. In some cases, additional confirmatory testing (such as Sanger sequencing for variant confirmation) may extend the turnaround time. Patients will be notified once the report is ready.

Patient Instructions

1
Before the Test:Before the test, a genetic counselling session will be conducted to document the patient's clinical history and family pedigree. No special preparation or fasting is required. Ensure the patient has not received any blood transfusions in the past 4 weeks. Inform the laboratory of any ongoing medications.
2
During the Test:A blood sample of 3-5 mL will be collected via venipuncture into an EDTA vacutainer, or a finger-prick blood sample may be collected on an FTA card. The procedure is quick and minimally invasive, similar to a routine blood draw.
3
After the Test:After sample collection, a small bandage will be applied to the puncture site. There are no restrictions on normal activities. Results will be available within 3 to 4 weeks and will be shared via the online portal, email, or WhatsApp. A post-test genetic counselling session is recommended to discuss the findings.

About This Test

Who Should Get This Test

The purpose of the ENO3 Gene Glycogen Storage Disease Type 13 NGS Genetic Test is to identify pathogenic mutations in the ENO3 gene that cause glycogen storage disease type 13. This test aids in confirming a clinical diagnosis of GSD13, differentiating it from other glycogen storage diseases, enabling carrier identification in family members, guiding treatment and dietary management strategies, informing genetic counselling for family planning decisions, and facilitating prenatal or preimplantation genetic diagnosis where applicable.

How to Prepare

  • Collect 3-5 mL of venous blood in an EDTA (lavender top) vacutainer
  • Alternatively, one drop of blood on an FTA card is acceptable
  • Previously extracted DNA (minimum 1 microgram) may also be submitted
  • Label the sample with the patient's full name, date of birth, and unique ID
  • Do not use heparin-treated tubes as they may interfere with NGS
  • Ensure the sample is transported at ambient room temperature within 48 hours
  • Avoid haemolysed or lipemic samples

Doctor's Notes

Reviewed by — MBBS, MD (Medical Genetics) · Reg. No. 8532

"Glycogen Storage Disease Type 13 is a rare metabolic disorder caused by mutations in the ENO3 gene. Patients presenting with unexplained hypoglycemia, hepatomegaly, cardiomegaly, or muscle weakness in early childhood should be evaluated with NGS-based genetic testing. Early identification through molecular diagnosis enables timely dietary management and monitoring of cardiac and hepatic function, which are critical for improving patient outcomes. Families with a history of metabolic disorders should consider genetic counselling and cascade testing."

Last medically reviewed: September 7, 2026

Test Parameters & Specifications

Sample TypeBlood or Extracted DNA or One drop Blood on FTA Card
Sample Volume3-5 mL EDTA whole blood
ContainerEDTA (Lavender Top) Vacutainer or FTA Card
Collection MethodVenipuncture / FTA Card Prick

Sample Stability

EDTA whole blood at ambient room temperature (15-25°C)
EDTA whole blood at 2-8°C
Extracted DNA at -20°C
FTA Card (dried blood spot) at room temperature
Sample Rejection Criteria:
  • Sample collected in heparin tubes
  • Haemolysed or severely lipemic blood samples
  • Insufficient sample volume
  • Sample received more than 7 days after collection without proper refrigeration
  • Unlabelled or mislabelled samples
  • Blood samples collected within 4 weeks of a blood transfusion

Understanding Your Results

The results of the ENO3 Gene Glycogen Storage Disease Type 13 NGS Genetic Test should be interpreted in the context of the patient's clinical presentation, family history, and other laboratory findings. Genetic counselling is strongly recommended both before and after testing to help the patient and family understand the implications of the results.
📊

Pathogenic or Likely Pathogenic variant(s) detected in ENO3 gene

Confirms a molecular diagnosis of Glycogen Storage Disease Type 13. Homozygous or compound heterozygous pathogenic variants are consistent with autosomal recessive GSD13. Clinical correlation and further metabolic workup are recommended. Family members should be offered carrier testing.

📊

Variant of Uncertain Significance (VUS) detected

A variant was identified in the ENO3 gene, but there is currently insufficient evidence to classify it as pathogenic or benign. Clinical correlation, parental testing, and functional studies may be needed for reclassification. Repeat genetic counselling is advised.

📊

No pathogenic variant detected

No disease-causing mutations were identified in the ENO3 gene by NGS. This result does not completely exclude GSD13, as mutations may lie in non-coding regulatory regions or large structural variants not detected by this method. If clinical suspicion remains high, additional testing such as biochemical enzyme assays or whole-exome sequencing should be considered.

📊

Carrier status (heterozygous pathogenic variant)

A single pathogenic variant in the ENO3 gene was detected, consistent with carrier status for GSD13. The individual is typically asymptomatic but may pass the variant to offspring. Genetic counselling and partner testing are recommended for family planning.

⚠️ When to Consult a Doctor:

Consult a healthcare provider or genetic specialist if your child or a family member exhibits symptoms such as unexplained low blood sugar levels, enlarged liver or heart, muscle weakness, exercise intolerance, delayed growth, or difficulty gaining weight. If the test result identifies a pathogenic variant or a VUS, seek genetic counselling to understand the implications and discuss management and family planning options.

Limitations

  • This test does not detect large genomic rearrangements, copy number variations, or deep intronic variants unless specifically designed for
  • Variants of Uncertain Significance (VUS) may be identified and may require further familial segregation analysis
  • A negative result does not completely rule out GSD13 if caused by mutations outside the tested regions
  • This test is not a substitute for biochemical enzyme activity assays where clinically indicated

Risks & Considerations

  • Minor bruising or discomfort at the blood collection site
  • Rare risk of infection at the puncture site
  • Emotional impact of genetic test results on the patient and family
  • Identification of Variants of Uncertain Significance (VUS) may cause anxiety without a definitive clinical interpretation

Interfering Factors

  • Degraded or insufficient DNA quality in the sample
  • Recent blood transfusion within the past 4 weeks may affect results
  • Contamination during sample collection or transport
  • Heparin-treated blood samples are not suitable and may interfere with NGS

Compare With Similar Tests

TestENO3 Gene Glycogen storage disease type 13 NGS Genetic TestWhole Exome Sequencing (WES)G6PC Gene NGS Genetic Test (GSD Type 1)
ComparisonENO3 Gene Glycogen storage disease type 13 NGS Genetic Test

Frequently Asked Questions

What is Glycogen Storage Disease Type 13 (GSD13)?
GSD13 is a rare inherited metabolic disorder caused by mutations in the ENO3 gene, which encodes the enzyme enolase 3. This enzyme is essential for the breakdown of glycogen into glucose for energy. Deficiency leads to abnormal glycogen accumulation, particularly in skeletal muscle, causing symptoms such as hypoglycemia, muscle weakness, hepatomegaly, and cardiomegaly.
What causes GSD13?
GSD13 is caused by pathogenic mutations in the ENO3 gene located on chromosome 17p13.2. The condition follows an autosomal recessive inheritance pattern, meaning an individual must inherit two mutated copies of the gene (one from each parent) to be affected.
What are the symptoms of GSD13?
Symptoms of GSD13 may include low blood sugar levels (hypoglycemia), difficulty gaining weight, delayed growth and development, enlarged liver (hepatomegaly), enlarged heart (cardiomegaly), abnormal muscle tone (hypotonia), muscle weakness, exercise intolerance, and difficulty breathing. The severity and onset of symptoms can vary between individuals.
How is the ENO3 Gene NGS Genetic Test performed?
The test uses Next-Generation Sequencing (NGS) technology to analyse the entire coding region and flanking intronic sequences of the ENO3 gene. A blood sample or extracted DNA is collected and processed in the laboratory. The sequencing data is analysed through bioinformatics pipelines to identify any mutations or variants in the gene.
What sample is required for this test?
The test requires either 3-5 mL of venous blood collected in an EDTA (lavender top) vacutainer, one drop of blood on an FTA card, or previously extracted DNA. No fasting is required prior to sample collection.
How long does it take to get the test results?
Results of the ENO3 Gene NGS Genetic Test are typically available within 3 to 4 weeks from the date the sample is received at the laboratory. The report is shared via the online portal, email, or WhatsApp.
What is the cost of the ENO3 Gene NGS Genetic Test in India?
The cost of the ENO3 Gene Glycogen Storage Disease Type 13 NGS Genetic Test at DNA Labs India is approximately Rs 20,000. This includes sample collection, NGS sequencing, and the genetic analysis report. Free home sample collection is available for online bookings across India.
Is genetic counselling required before taking this test?
Yes, a pre-test genetic counselling session is strongly recommended. During this session, a genetic counsellor will document the patient's clinical history, draw a pedigree chart of family members affected with glycogen storage disease type 13, and explain the implications, benefits, and limitations of genetic testing.
Can GSD13 be treated or managed after diagnosis?
While there is no cure for GSD13, early diagnosis allows for effective management of symptoms. Treatment strategies may include a high-protein or complex-carbohydrate diet to prevent hypoglycemia, frequent small meals, medications to manage blood sugar levels, regular monitoring of liver and cardiac function, and supportive therapies such as physiotherapy for muscle weakness.
What does a negative test result mean?
A negative result means no pathogenic variants were detected in the ENO3 gene using NGS. However, this does not completely rule out GSD13, as mutations may exist in non-coding regulatory regions or involve large structural variants not captured by this method. If clinical suspicion remains, your doctor may recommend additional testing such as whole-exome sequencing or biochemical enzyme assays.
Is home sample collection available for this test?
Yes, DNA Labs India offers free home sample collection for the ENO3 Gene Glycogen Storage Disease Type 13 NGS Genetic Test for online bookings. This service is available in major cities across India including Mumbai, Delhi, Bangalore, Hyderabad, Chennai, Kolkata, Pune, Ahmedabad, and many more.
Can this test be used for prenatal diagnosis of GSD13?
Yes, if the causative ENO3 gene mutations have been previously identified in an affected family member, prenatal testing or preimplantation genetic diagnosis (PGD) may be offered. This should be discussed with a genetic counsellor or clinical geneticist to understand the options and implications for family planning.
Worried about the process? Our certified phlebotomists collect thousands of samples every month across India. The process takes under 5 minutes and is virtually painless. Questions? Message us on WhatsApp — we're here 7 days a week.

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