Skip to main content
DNA Labs India

Metatranscriptome Sequencing and Analysis Test

DNA Labs India | ISO 9001:2015 Certified

Metatranscriptome Sequencing and Analysis Test

Short Name: Metatranscriptome Sequencing

Also known as: Metatranscriptomics, RNA Metatranscriptome Sequencing, Microbiome RNA Sequencing

Metatranscriptome Sequencing and Analysis Test test available at DNA Labs India for ₹42,000. Uses Next-Generation Sequencing (NGS), Bioinformatics Pipeline on Various biological samples (e.g., stool, respiratory swabs, tissue) samples. Results in 8 weeks. Free home collection in 300+ cities across India.

Sequencing🏠 Home Collection

🩺 Medically Reviewed By

Overview

The primary purpose of metatranscriptome sequencing is to analyze the active gene expression in a sample, helping to diagnose diseases, study microbiome functions, and identify potential therapeutic targets for personalized medicine.

Test Code
3425
Price
₹42,000
Sample Type
Various biological samples (e.g., stool, respiratory swabs, tissue)
Result Time
8 weeks
Fasting Required
No
Method
Next-Generation Sequencing (NGS), Bioinformatics Pipeline
Step 1

Sample Collection

No specific preparation required, but follow sample collection instructions provided by the lab.

Method: Home collection or walk-in

Step 2

Laboratory Analysis

Sample collected by trained phlebotomist or self-collection as per guidelines, ensuring minimal contamination.

Step 3

Report Delivery

Sample transported to lab under controlled conditions to preserve RNA integrity.

Timeline: 8 weeks

Patient Instructions

1
Before the Test:Ensure sample is collected properly and transported to the lab following guidelines to maintain RNA quality.
2
During the Test:RNA is extracted, sequenced using next-generation sequencing, and analyzed with bioinformatics tools for gene expression and microbial identification.
3
After the Test:Report generated with detailed findings, including gene expression patterns, microbial diversity, and potential clinical implications.

About This Test

Who Should Get This Test

The primary purpose of metatranscriptome sequencing is to analyze the active gene expression in a sample, helping to diagnose diseases, study microbiome functions, and identify potential therapeutic targets for personalized medicine.

How to Prepare

  • Use sterile containers provided
  • Store sample at appropriate temperature (e.g., -80°C)
  • Label samples correctly with patient details
  • Transport to lab within specified time frame

Doctor's Notes

Reviewed by — MBBS, MD (Microbiology) · Reg. No. 27670

"This test provides a comprehensive view of active microbial communities, aiding in precise diagnosis and treatment planning."

Last medically reviewed: September 7, 2026

Test Parameters & Specifications

Sample TypeVarious biological samples (e.g., stool, respiratory swabs, tissue)
Sample VolumeAs per requirement
ContainerSterile container with RNA stabilizer
Collection MethodHome collection or walk-in

Sample Stability

Stable at -80°C for long-term storage
At room temperature for limited hours only
Sample Rejection Criteria:
  • Insufficient sample volume
  • Degraded RNA
  • Contaminated sample
  • Improper labeling or documentation

Understanding Your Results

Results from metatranscriptome sequencing provide detailed insights into the active microbial communities and gene expression patterns in the sample, aiding in clinical diagnosis and research.
Compare with reference databases for pathogen identification
Analyze gene expression levels for disease markers
Assess microbial diversity for health status
Consult with a specialist for clinical correlation and treatment planning
⚠️ When to Consult a Doctor:

If symptoms persist after treatment, or for personalized therapy based on gene expression profiles, consult an infectious disease specialist or relevant healthcare provider.

Limitations

  • High cost compared to some other tests
  • Long turnaround time
  • Requires specialized equipment and expertise
  • May not detect all microorganisms if RNA is degraded

Risks & Considerations

  • No direct risks from the sequencing process
  • Minimal risk from sample collection, such as minor discomfort

Interfering Factors

  • Sample degradation due to improper storage
  • Contamination during collection or processing
  • Low RNA yield from certain samples

Compare With Similar Tests

TestMetatranscriptome Sequencing and Analysis16S rRNA SequencingMetagenomic SequencingWhole Genome SequencingMicrobiome Profiling
ComparisonMetatranscriptome Sequencing and AnalysisFocuses on bacterial identification, less functional insight compared to metatranscriptomicsAnalyzes DNA, not active gene expression, providing different insightsProvides complete genetic information but not expression dataMay use different techniques, less comprehensive for RNA-based functional analysis

Frequently Asked Questions

What is metatranscriptome sequencing?
Metatranscriptome sequencing is a technique that analyzes all RNA transcripts in a sample to study gene expression and microbial activity.
How much does metatranscriptome sequencing cost in India?
The cost is approximately INR 42000, which includes sample collection, sequencing, analysis, and reporting.
What samples are required for this test?
Various biological samples such as stool, respiratory swabs, or tissue can be used, depending on the clinical indication.
How long does it take to get results?
The turnaround time is typically 8 weeks, with reports delivered via online portal, email, or WhatsApp.
Is home collection available for this test?
Yes, free home sample collection is available for online bookings across India.
What diseases can be diagnosed with metatranscriptome sequencing?
It can help diagnose infectious diseases, gastrointestinal disorders, respiratory infections, and contribute to cancer research.
How is metatranscriptome sequencing different from metagenomics?
Metatranscriptomics focuses on RNA to study active gene expression, while metagenomics analyzes DNA for genetic potential.
Is the test covered by insurance?
Coverage depends on the insurance provider; it is generally not covered under standard schemes like PMJAY or CGHS.
What are the limitations of this test?
Limitations include high cost, long turnaround time, and the need for specialized expertise and equipment.
How should I prepare for sample collection?
No specific preparation is required, but follow the lab's instructions for sample collection and storage.
Can this test be used for cancer research?
Yes, it can identify gene expression patterns in cancer cells, aiding in biomarker discovery and therapy development.
Who should consider this test?
Individuals with unexplained symptoms, researchers studying microbiomes, or clinicians seeking advanced diagnostic tools for infections.
Worried about the process? Our certified phlebotomists collect thousands of samples every month across India. The process takes under 5 minutes and is virtually painless. Questions? Message us on WhatsApp — we're here 7 days a week.

Related Tests

For Hospitals & Clinics

Reference Laboratory Services

We serve as a reference laboratory for hospitals and clinics across India. Send samples from your facility with same-day pickup, priority processing, and results delivered through our online portal. Competitive institutional pricing available.

LIMS Integration

Your Data Privacy

Your medical data is protected under Indian law.

Stored in India: All patient records are stored on servers located in India. No data is transferred outside the country.

DPDP Act Compliant: Under the Digital Personal Data Protection Act 2023, you can request deletion of your records at any time by contacting support.

Book Your Test

Enter your details and we'll connect you within 15 minutes.

🧬

Quick Connect

Enter your mobile number and we’ll connect you with the team.

+91

✅ Connecting you now...

🔒 Your number is used to respond to this request.