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DNA Labs India

MT-TR Gene Encephalomyopathy, mitochondrial, MT-TR related NGS Genetic Test

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MT-TR Gene Encephalomyopathy, mitochondrial, MT-TR related NGS Genetic Test

Short Name: MT-TR Encephalomyopathy NGS

Also known as: MT-TR Gene Encephalomyopathy Genetic Test, Mitochondrial MT-TR NGS Panel, Encephalomyopathy Mitochondrial Gene Sequencing

MT-TR Gene Encephalomyopathy, mitochondrial, MT-TR related NGS Genetic Test test available at DNA Labs India for ₹20,000. Uses Next-Generation Sequencing (NGS) on Blood or Extracted DNA or One drop Blood on FTA Card samples. Results in Reports are usually available within 3 to 4 weeks after the sample reaches the laboratory. The turnaround time may slightly vary during festive seasons or remote locations.. Free home collection in 300+ cities across India.

NGS Genetic Test🏠 Home Collection

🩺 Medically Reviewed By

Overview

The purpose of this NGS genetic test is to identify pathogenic mutations in the MT-TR gene and the complete mitochondrial genome, thereby confirming the diagnosis of MT-TR related encephalomyopathy, facilitating early intervention, and enabling informed family planning. The test also supports the clinician in distinguishing mitochondrial disorders from other neuromuscular conditions.

Test Code
4052
Price
₹20,000
Sample Type
Blood or Extracted DNA or One drop Blood on FTA Card
Result Time
Reports are usually available within 3 to 4 weeks after the sample reaches the laboratory. The turnaround time may slightly vary during festive seasons or remote locations.
Fasting Required
No
Method
Next-Generation Sequencing (NGS)
Step 1

Sample Collection

No fasting required. Please carry any previous clinical records, brain MRI reports, and results of prior biochemical testing. A genetic counselling session will be scheduled to draw a family pedigree.

Method: Peripheral venipuncture or fingerstick

Step 2

Laboratory Analysis

A trained phlebotomist will collect a simple blood sample (or FTA spot / extracted DNA). The procedure is safe and takes less than 5 minutes.

Step 3

Report Delivery

No specific precautions are needed. The sample will be transported to the laboratory under controlled conditions. You may resume normal activities immediately.

Timeline: Reports are usually available within 3 to 4 weeks after the sample reaches the laboratory. The turnaround time may slightly vary during festive seasons or remote locations.

Patient Instructions

1
Before the Test:No special preparation is required. The genetic counselling session prior to testing helps assess the risk and the clinical utility of the NGS test. Please bring all relevant medical records and MRI/LDH/lactate reports.
2
During the Test:During the test, a blood sample is collected after confirming the patient's identity. For at-home collection, the phlebotomist will visit as scheduled. All samples are coded and handled in compliance with data privacy regulations.
3
After the Test:After the test, you will receive a full report including raw data files. A post-test genetic counselling session can be scheduled to discuss the results and their implications for family members.

About This Test

Who Should Get This Test

The purpose of this NGS genetic test is to identify pathogenic mutations in the MT-TR gene and the complete mitochondrial genome, thereby confirming the diagnosis of MT-TR related encephalomyopathy, facilitating early intervention, and enabling informed family planning. The test also supports the clinician in distinguishing mitochondrial disorders from other neuromuscular conditions.

How to Prepare

  • For blood: collect in EDTA tube under aseptic precautions
  • For FTA card: apply one drop of blood onto the card and air dry
  • For extracted DNA: provide at least 5 µg in sterile DNase-free tube
  • Label the sample with patient name, date of birth, and collection time

Doctor's Notes

Reviewed by — MBBS, MD (General Medicine) · Reg. No. 8052

"For couples with a family history of mitochondrial disorders, genetic counselling and segregation analysis are essential to understand maternal inheritance patterns and reproductive risks."

Last medically reviewed: September 7, 2026

Test Parameters & Specifications

Sample TypeBlood or Extracted DNA or One drop Blood on FTA Card
Sample Volume2 mL blood / 5 µg DNA / 1 FTA spot
ContainerEDTA tube / sterile swab / FTA card
Collection MethodPeripheral venipuncture or fingerstick

Sample Stability

Whole blood (EDTA): 7 days at 2-8°C
FTA card: 6 months at ambient temperature
Extracted DNA: 1 year at -20°C
Sample Rejection Criteria:
  • Hemolysed or lipemic sample
  • Insufficient sample quantity
  • Improperly labelled sample
  • Sample received in non-EDTA tube

Understanding Your Results

The clinical report will be interpreted by a clinical geneticist and correlated with the patient's clinical history. Alterations in the MT-TR gene will be classified according to ACMG-AMP guidelines. The report does not constitute a final medical diagnosis and must be reviewed by the referring physician.
📊

Pathogenic variant detected

Confirms diagnosis of MT-TR related mitochondrial encephalomyopathy. Inform maternal relatives and consider reproductive counselling.

📊

Likely pathogenic variant detected

High suspicion for pathogenicity. Clinical correlation and family segregation studies are recommended.

📊

Variant of uncertain significance (VUS)

Cannot classify at present. Further testing of family members and functional studies may be needed.

📊

No pathogenic variant detected

No MT-TR mutation identified. Consider other genetic causes or non-genetic aetiologies.

⚠️ When to Consult a Doctor:

Consult a neurologist or clinical geneticist if you or your child experience unexplained seizures, developmental regression, muscle weakness, or visual/hearing impairment, especially if there is a family history of encephalomyopathy or mitochondrial disorder.

Limitations

  • NGS may not reliably detect large mitochondrial deletions or structural variants
  • Low-level heteroplasmy (<10%) may be below the detection threshold
  • Variants of uncertain significance may require additional functional studies
  • A negative result does not completely exclude mitochondrial disease caused by nuclear genes or other mechanisms

Risks & Considerations

  • Minor pain or bruising at the blood collection site
  • No significant medical risks associated with the test itself

Interfering Factors

  • Sample hemolysis or DNA degradation
  • Low heteroplasmy level (<10%) may be missed
  • Recent blood transfusion (contamination with donor DNA)
  • Presence of nuclear mitochondrial pseudogenes (NUMTs)

Compare With Similar Tests

TestMT-TR Gene Encephalomyopathy, mitochondrial, MT-TR related NGS Genetic TestWhole Exome Sequencing (WES)Sanger SequencingMitochondrial Genome NGS Panel
ComparisonMT-TR Gene Encephalomyopathy, mitochondrial, MT-TR related NGS Genetic Test

Frequently Asked Questions

What is MT-TR gene encephalomyopathy?
MT-TR gene encephalomyopathy is a rare mitochondrial disorder caused by mutations in the MT-TR gene, which provides instructions for transfer RNA. It affects the brain and muscles, leading to symptoms like seizures, developmental delay, weakness, and visual/hearing problems.
How is MT-TR gene encephalomyopathy inherited?
MT-TR is located in mitochondrial DNA, which is inherited maternally. This means the condition is passed from mother to all children, but only daughters transmit the mutation to the next generation.
What are the common symptoms of MT-TR-related encephalomyopathy?
Common symptoms include muscle weakness, difficulty walking, loss of motor skills, seizures, developmental delays, learning disabilities, visual and hearing problems. Symptoms can begin in childhood or later in adulthood.
What is the NGS genetic test for MT-TR gene encephalomyopathy?
It is a next-generation sequencing test that analyzes the entire mitochondrial DNA for mutations in MT-TR and other mitochondrial genes. It provides a comprehensive molecular diagnosis of MT-TR related encephalomyopathy.
What sample is required for this genetic test?
The test can be performed on 2 mL blood in an EDTA tube, extracted DNA (at least 5 µg), or one drop of blood on an FTA card. The sample is used for mitochondrial DNA analysis.
Is fasting required before the test?
No, fasting is not required. You can eat and drink normally before the blood sample is collected. No special preparation is needed for the genetic test.
How long will it take to get the test reports?
The test reports are typically delivered within 3 to 4 weeks after the sample is received at the laboratory. The turnaround time includes genetic counselling, sequencing, and data interpretation.
What is the cost of the test in India?
The cost of the MT-TR gene encephalomyopathy NGS genetic test at DNA Labs India is INR 20,000. Free home sample collection is included for online bookings across all major cities.
Does insurance cover this genetic test?
This test is generally not covered by standard health insurance plans in India. It is an out-of-pocket expense. However, some private insurers may consider coverage if the test is prescribed by a specialist and pre-authorization is obtained.
Why is genetic counselling recommended before testing?
Genetic counselling helps to assess the clinical significance of the test, draw a family pedigree, explain the inheritance pattern, and understand the emotional and reproductive implications of the results. It is essential for informed consent.
Will I receive raw data files (FASTQ, VCF) with my test report?
Yes. DNA Labs India is the only laboratory that shares raw data files, including FASTQ, VCF, and BAM, along with the conclusive clinical report. This transparency allows clinicians and researchers to perform additional validation if needed.
Can this test detect other mitochondrial disorders besides MT-TR?
Yes, the NGS-based mitochondrial genome analysis covers the entire mtDNA, so it can detect pathogenic mutations in other mitochondrial genes associated with conditions like MELAS, MERRF, NARP, and Leigh syndrome. This is valuable for patients with overlapping phenotypes.
Worried about the process? Our certified phlebotomists collect thousands of samples every month across India. The process takes under 5 minutes and is virtually painless. Questions? Message us on WhatsApp — we're here 7 days a week.

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Your Data Privacy

Your medical data is protected under Indian law.

Stored in India: All patient records are stored on servers located in India. No data is transferred outside the country.

DPDP Act Compliant: Under the Digital Personal Data Protection Act 2023, you can request deletion of your records at any time by contacting support.

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