Skip to main content
DNA Labs India

SHH Gene Holoprosencephaly type 3 NGS Genetic Test

DNA Labs India | ISO 9001:2015 Certified

SHH Gene Holoprosencephaly type 3 NGS Genetic Test

Short Name: SHH Gene HPE Type 3 Test

Also known as: SHH Gene Test, Holoprosencephaly Type 3 Genetic Test, Sonic Hedgehog Gene Test

SHH Gene Holoprosencephaly type 3 NGS Genetic Test test available at DNA Labs India for ₹20,000. Uses NGS (Next Generation Sequencing) on Blood or Extracted DNA or One drop Blood on FTA Card samples. Results in 3 to 4 Weeks. Free home collection in 300+ cities across India.

Genetic TestPediatric🏠 Home Collection

🩺 Medically Reviewed By

Overview

The purpose of the SHH Gene Holoprosencephaly Type 3 NGS Genetic Test is to detect mutations in the SHH gene for accurate diagnosis of Holoprosencephaly Type 3, enabling genetic counseling, family planning, and informed medical management.

Test Code
5778
ICD Code
Q04.2
Price
₹20,000
Sample Type
Blood or Extracted DNA or One drop Blood on FTA Card
Result Time
3 to 4 Weeks
Fasting Required
No
Method
NGS (Next Generation Sequencing)
Step 1

Sample Collection

No specific preparation is required. Provide clinical history and undergo genetic counseling to draw a pedigree chart.

Method: Venipuncture or blood drop

Step 2

Laboratory Analysis

A blood sample is drawn via venipuncture or a blood drop is collected on an FTA card by a trained phlebotomist.

Step 3

Report Delivery

Apply pressure to the puncture site to prevent bleeding. Store the sample as instructed and send to the laboratory promptly.

Timeline: 3 to 4 Weeks

Patient Instructions

1
Before the Test:Undergo genetic counseling to understand the test implications and provide informed consent. Share family medical history.
2
During the Test:The test involves Next Generation Sequencing of the SHH gene from a blood sample, performed in a certified laboratory.
3
After the Test:Review results with a genetic counselor or physician. Discuss potential treatment options, support resources, and family screening.

About This Test

Who Should Get This Test

The purpose of the SHH Gene Holoprosencephaly Type 3 NGS Genetic Test is to detect mutations in the SHH gene for accurate diagnosis of Holoprosencephaly Type 3, enabling genetic counseling, family planning, and informed medical management.

How to Prepare

  • Ensure proper identification of the patient
  • Use sterile collection equipment
  • Label the sample correctly with patient details
  • Transport at ambient room temperature

Doctor's Notes

Reviewed by — MBBS, MD (Medical Genetics) · Reg. No. 8532

"This test is crucial for early diagnosis and genetic counseling in families with a history of holoprosencephaly, aiding in prenatal and postnatal management."

Last medically reviewed: September 7, 2026

Test Parameters & Specifications

Sample TypeBlood or Extracted DNA or One drop Blood on FTA Card
Sample Volume3-5 ml for blood
ContainerEDTA tube or FTA card
Collection MethodVenipuncture or blood drop

Sample Stability

Blood: 48 hours at room temperature
Extracted DNA: Stable for longer periods if stored properly
Sample Rejection Criteria:
  • Hemolyzed or clotted sample
  • Insufficient sample volume
  • Incorrect labeling or missing information

Understanding Your Results

Results from the SHH Gene Holoprosencephaly Type 3 NGS Genetic Test indicate the presence or absence of mutations in the SHH gene. Interpretation should be done by a qualified geneticist or healthcare provider.
📊

No pathogenic variant detected

No SHH gene mutation identified; clinical correlation recommended.

📊

Pathogenic variant detected

Confirms diagnosis of HPE Type 3; genetic counseling advised for family implications.

📊

Variant of uncertain significance

Further testing or family studies may be needed for clarification.

⚠️ When to Consult a Doctor:

Consult a doctor or genetic counselor immediately after receiving results, especially if a pathogenic variant is detected, to discuss management, recurrence risks, and family planning options.

Limitations

  • May not detect all genetic variants or mosaicism
  • Results require interpretation by a genetic counselor
  • Does not rule out other genetic causes of holoprosencephaly

Risks & Considerations

  • Minimal risk from blood draw, such as bruising or infection
  • Psychological impact of genetic results; counseling recommended

Interfering Factors

  • Sample contamination during collection or transport
  • Degraded DNA due to improper storage
  • Hemolyzed blood sample

Compare With Similar Tests

TestSHH Gene Holoprosencephaly type 3 NGS Genetic TestWhole Exome SequencingChromosomal MicroarrayTargeted Gene Panel for HPEPrenatal Genetic Testing
ComparisonSHH Gene Holoprosencephaly type 3 NGS Genetic Test

Frequently Asked Questions

What is the SHH Gene Holoprosencephaly Type 3 NGS Genetic Test?
It is a genetic test that uses Next Generation Sequencing to detect mutations in the SHH gene, which causes Holoprosencephaly Type 3, a disorder affecting brain and facial development.
What is the cost of this test?
The cost is INR 20000, with free home sample collection available across India.
What are the symptoms of Holoprosencephaly Type 3?
Symptoms include cleft lip/palate, microcephaly, abnormal facial features, intellectual disability, seizures, and abnormal brain structure.
How is the test performed?
A blood sample is collected and analyzed using NGS technology in a laboratory to identify SHH gene mutations.
What is the turnaround time for results?
Results are typically available within 3 to 4 weeks after sample collection.
Is fasting required for this test?
No, fasting is not required.
Who should consider this test?
Individuals with a family history of holoprosencephaly, prenatal abnormalities, or clinical symptoms suggestive of HPE Type 3.
What does a positive result mean?
A positive result indicates a pathogenic mutation in the SHH gene, confirming diagnosis and aiding in genetic counseling.
Is genetic counseling provided?
Yes, genetic counseling is recommended before and after testing to interpret results and discuss implications.
Can this test be done during pregnancy?
It is typically a postnatal test, but prenatal testing options may be available through other methods; consult a genetic counselor.
What files are provided with the report?
DNA Labs India provides Raw Data, FASTQ, and VCF files along with the clinical test report for transparency.
How do I book this test?
You can book online through DNA Labs India's website, with free home sample collection available in many cities across India.
Worried about the process? Our certified phlebotomists collect thousands of samples every month across India. The process takes under 5 minutes and is virtually painless. Questions? Message us on WhatsApp — we're here 7 days a week.

Related Tests

For Hospitals & Clinics

Reference Laboratory Services

We serve as a reference laboratory for hospitals and clinics across India. Send samples from your facility with same-day pickup, priority processing, and results delivered through our online portal. Competitive institutional pricing available.

LIMS Integration

Your Data Privacy

Your medical data is protected under Indian law.

Stored in India: All patient records are stored on servers located in India. No data is transferred outside the country.

DPDP Act Compliant: Under the Digital Personal Data Protection Act 2023, you can request deletion of your records at any time by contacting support.

Book Your Test

Enter your details and we'll connect you within 15 minutes.

🧬

Quick Connect

Enter your mobile number and we’ll connect you with the team.

+91

✅ Connecting you now...

🔒 Your number is used to respond to this request.