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AFG3L2 Gene Spastic ataxia type 5, autosomal recessive NGS Genetic Test

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AFG3L2 Gene Spastic ataxia type 5, autosomal recessive NGS Genetic Test

Short Name: AFG3L2 SPAX5 NGS

Also known as: AFG3L2 Gene Sequencing, SPAX5 Genetic Test, Autosomal Recessive Spastic Ataxia Type 5 NGS, AFG3L2 Mutation Analysis

AFG3L2 Gene Spastic ataxia type 5, autosomal recessive NGS Genetic Test test available at DNA Labs India for ₹20,000. Uses Next-Generation Sequencing (NGS) on Blood samples. Results in Results are usually delivered within 3 to 4 weeks from the date the sample is received by the laboratory.. Free home collection in 300+ cities across India.

NGS Genetic Test🏠 Home Collection

🩺 Medically Reviewed By

Overview

The purpose of this NGS genetic test is to identify disease-causing mutations in the AFG3L2 gene in individuals with clinical features suggestive of spastic ataxia type 5 (SPAX5). It helps confirm a suspected diagnosis, clarify the inheritance pattern for at-risk family members, and support informed family planning decisions.

Test Code
4511
Price
₹20,000
Sample Type
Blood
Result Time
Results are usually delivered within 3 to 4 weeks from the date the sample is received by the laboratory.
Fasting Required
No
Method
Next-Generation Sequencing (NGS)
Step 1

Sample Collection

No fasting is required. A genetic counseling session is recommended and is part of the pre-test process to draw a pedigree chart of family members affected with SPAX5.

Method: Venipuncture

Step 2

Laboratory Analysis

A blood sample is drawn by a trained phlebotomist using a sterile needle. The procedure usually takes a few minutes and is generally safe.

Step 3

Report Delivery

You can resume normal activities immediately after blood collection. The sample is transported to the laboratory for NGS analysis and the report is delivered within 3 to 4 weeks.

Timeline: Results are usually delivered within 3 to 4 weeks from the date the sample is received by the laboratory.

Patient Instructions

1
Before the Test:No fasting is required. The patient will have a genetic counseling session to discuss the test and draw a family pedigree chart.
2
During the Test:A blood sample is drawn from a vein in the arm. The process takes approximately 5 minutes.
3
After the Test:The patient can resume routine activities immediately after sample collection. Results are typically available in 3 to 4 weeks.

About This Test

Who Should Get This Test

The purpose of this NGS genetic test is to identify disease-causing mutations in the AFG3L2 gene in individuals with clinical features suggestive of spastic ataxia type 5 (SPAX5). It helps confirm a suspected diagnosis, clarify the inheritance pattern for at-risk family members, and support informed family planning decisions.

How to Prepare

  • No fasting required
  • Prior genetic counseling is recommended
  • Blood sample to be collected in an EDTA tube
  • Carry previous clinical reports, imaging findings, and family history details, if available

Doctor's Notes

Reviewed by — MBBS, MD (Medical Genetics) · Reg. No. 8532

"Genetic testing for SPAX5 provides a reliable way to confirm a clinical diagnosis and supports informed reproductive counseling for affected families."

Last medically reviewed: September 7, 2026

Test Parameters & Specifications

Sample TypeBlood
Sample VolumeAs per laboratory protocol
ContainerEDTA tube
Collection MethodVenipuncture

Sample Stability

Ambient room temperature during transport
Blood sample should reach the laboratory within 24 hours of collection
Sample Rejection Criteria:
  • Clotted or hemolyzed blood sample
  • Incorrectly labeled sample
  • Incomplete test requisition form
  • Sample without signed consent or genetic counseling documentation

Understanding Your Results

The genetic test result should be interpreted by a clinical geneticist in the context of the patient's clinical findings, imaging results, and family pedigree.
📊

Pathogenic variant in AFG3L2

Confirms a diagnosis of spastic ataxia type 5 (SPAX5).

📊

Likely pathogenic variant in AFG3L2

Strongly suggests SPAX5; additional familial or functional evidence may be helpful.

📊

Variant of uncertain significance (VUS)

Not diagnostic; further genetic testing and family segregation studies may be required.

📊

No pathogenic variant detected

Reduces the likelihood of SPAX5 but does not exclude it; other ataxia causes should be considered.

⚠️ When to Consult a Doctor:

Consult your referring physician or a clinical geneticist if you or a family member has progressive gait difficulties, incoordination, spasticity, speech or swallowing problems, or a known family history of SPAX5.

Limitations

  • This test evaluates only the AFG3L2 gene and may not detect other causes of ataxia.
  • NGS may not reliably detect large deletions, duplications, or repeat expansions.
  • Variants of uncertain significance may require additional family studies.
  • A negative result does not exclude a genetic cause; further testing may be recommended.

Risks & Considerations

  • Minor pain or bruising at the venipuncture site
  • Rare chance of bleeding or infection

Interfering Factors

  • Insufficient or degraded DNA from the blood sample
  • Sample contamination during collection or processing
  • Maternal cell contamination in blood samples

Frequently Asked Questions

What is the cost of the AFG3L2 gene spastic ataxia type 5 NGS genetic test?
The test costs INR 20,000 at DNA Labs India. This includes free home sample collection in many cities and a genetic counseling session.
What sample is needed for this test?
A blood sample is needed. The blood sample is used for DNA extraction and next-generation sequencing of the AFG3L2 gene.
Do I need to fast before the test?
No, fasting is not required for this genetic test. You can eat and drink normally before sample collection.
How long does it take to get results?
The report is usually available within 3 to 4 weeks after the laboratory receives the sample.
Is home sample collection available?
Yes, DNA Labs India offers free home sample collection for online bookings for this test across multiple cities in India.
What is spastic ataxia type 5?
SPAX5 is a rare inherited neurological disorder caused by mutations in the AFG3L2 gene. It affects the cerebellum and spinal cord and causes progressive coordination and movement problems.
How is SPAX5 inherited?
SPAX5 is inherited in an autosomal recessive pattern, meaning both copies of the AFG3L2 gene must have a mutation for the condition to develop.
What are the main symptoms of SPAX5?
Symptoms include difficulty walking, uncoordinated movements, muscle stiffness, tremors, speech and swallowing difficulties, vision problems, and cognitive impairment.
What does the NGS test look for?
The test looks for mutations in the AFG3L2 gene using next-generation sequencing. It helps confirm a clinical diagnosis of SPAX5.
Who should consider this test?
Individuals with symptoms suggestive of spastic ataxia, those with a family history of autosomal recessive ataxia, or those referred by a neurologist or geneticist may consider this test.
Is genetic counseling needed before the test?
Yes, a genetic counseling session is recommended and is part of the pre-test process to draw a pedigree chart and discuss the implications of the test.
Can this test guide family planning decisions?
Yes, the test can provide information about the inheritance pattern and recurrence risk, which can help families make informed reproductive decisions.
Worried about the process? Our certified phlebotomists collect thousands of samples every month across India. The process takes under 5 minutes and is virtually painless. Questions? Message us on WhatsApp — we're here 7 days a week.

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