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AP4M1 Gene Microcephaly, AP4M1 related NGS Genetic Test

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AP4M1 Gene Microcephaly, AP4M1 related NGS Genetic Test

Short Name: AP4M1 NGS Test

Also known as: AP4M1 Gene Sequencing, AP4M1-Related Microcephaly Genetic Test

AP4M1 Gene Microcephaly, AP4M1 related NGS Genetic Test test available at DNA Labs India for ₹20,000. Uses Next Generation Sequencing (NGS) on Blood or Extracted DNA or One drop Blood on FTA Card samples. Results in Results are typically available within 3 to 4 weeks after the sample reaches the laboratory.. Free home collection in 300+ cities across India.

NGS Genetic Test🏠 Home Collection

🩺 Medically Reviewed By

Overview

The purpose of this NGS genetic test is to identify pathogenic mutations in the AP4M1 gene that are associated with microcephaly and related neurological phenotypes. This test helps in confirming a clinical diagnosis, differentiating from other genetic causes of microcephaly, and providing essential information for genetic counseling, family planning, and management of the condition.

Test Code
5853
CPT Code
81407
ICD Code
Q02
Price
₹20,000
Sample Type
Blood or Extracted DNA or One drop Blood on FTA Card
Result Time
Results are typically available within 3 to 4 weeks after the sample reaches the laboratory.
Fasting Required
No
Method
Next Generation Sequencing (NGS)
Step 1

Sample Collection

No fasting required. A genetic counseling session is recommended before the test to discuss the implications and obtain informed consent.

Method: Venipuncture or FTA card spot

Step 2

Laboratory Analysis

Blood sample is collected by a trained phlebotomist using standard venipuncture technique. For FTA card, a drop of blood is placed on the card and allowed to dry.

Step 3

Report Delivery

No special precautions. The sample is transported to the laboratory at ambient temperature.

Timeline: Results are typically available within 3 to 4 weeks after the sample reaches the laboratory.

Patient Instructions

1
Before the Test:No special preparation is required. However, a genetic counseling session is recommended to discuss the purpose, risks, and benefits of the test.
2
During the Test:A blood sample is drawn from a vein in your arm. The procedure is quick and minimally invasive.
3
After the Test:You can resume normal activities immediately. The sample will be sent to the laboratory for analysis.

About This Test

Who Should Get This Test

The purpose of this NGS genetic test is to identify pathogenic mutations in the AP4M1 gene that are associated with microcephaly and related neurological phenotypes. This test helps in confirming a clinical diagnosis, differentiating from other genetic causes of microcephaly, and providing essential information for genetic counseling, family planning, and management of the condition.

How to Prepare

  • Ensure the patient's clinical history and pedigree chart are provided.
  • Use EDTA vacutainer for blood collection.
  • For FTA card, ensure the blood spot is completely dry before packaging.
  • Label the sample with patient's name, date of birth, and collection date.

Doctor's Notes

Reviewed by — MBBS, MD (Medical Genetics) · Reg. No. 8532

"Genetic testing for AP4M1 is crucial for accurate diagnosis and family counseling in microcephaly cases."

Last medically reviewed: September 7, 2026

Test Parameters & Specifications

Sample TypeBlood or Extracted DNA or One drop Blood on FTA Card
Sample Volume2-3 ml blood or 1 drop on FTA card
ContainerEDTA vacutainer or FTA card
Collection MethodVenipuncture or FTA card spot

Sample Stability

Blood: 24 hours at room temperature, 7 days at 2-8°C
Extracted DNA: 1 year at -20°C
FTA card: Stable for months at room temperature
Sample Rejection Criteria:
  • Hemolyzed or clotted blood sample
  • Insufficient sample volume
  • Improperly labeled sample
  • Sample received after prolonged transit without proper storage

Understanding Your Results

The interpretation of the AP4M1 gene test is based on the presence or absence of pathogenic variants. A positive result confirms the genetic diagnosis, while a negative result does not exclude the possibility of other genetic causes.
📊

Pathogenic variant detected

Confirms the diagnosis of AP4M1-related microcephaly. Genetic counseling is recommended for the family.

Action: Discuss management options and reproductive planning.

📊

Likely pathogenic variant detected

Highly suggestive of the condition; further evidence may be needed.

Action: Consider segregation analysis in family members.

📊

Variant of uncertain significance (VUS)

The clinical significance is unknown; additional testing may be required.

Action: Follow-up with genetic counselor and consider functional studies.

📊

No pathogenic variant detected

No mutation in AP4M1 gene; other causes of microcephaly should be considered.

Action: Further genetic testing or clinical evaluation may be needed.

⚠️ When to Consult a Doctor:

If you or your child have symptoms of microcephaly, developmental delay, seizures, or a family history of the condition, consult a neurologist or geneticist for evaluation and testing.

Limitations

  • This test only analyzes the AP4M1 gene; other genetic causes of microcephaly are not evaluated.
  • Variant of uncertain significance (VUS) may require further family studies.
  • Regulatory regions and deep intronic variants may not be fully covered.
  • This test does not detect all types of mutations (e.g., large rearrangements).

Risks & Considerations

  • Minimal risk of bruising or infection at the blood draw site
  • Psychological impact of receiving genetic results
  • Potential for uncertain results (VUS)

Interfering Factors

  • Contaminated or degraded DNA sample
  • Incomplete clinical information
  • Presence of large deletions/duplications not detected by standard NGS
  • Mosaic mutations may be missed

Compare With Similar Tests

TestAP4M1 Gene Microcephaly, AP4M1 related NGS Genetic TestChromosomal Microarray (CMA)Whole Exome Sequencing (WES)
ComparisonAP4M1 Gene Microcephaly, AP4M1 related NGS Genetic TestCMA detects copy number variations across the genome, while this NGS test focuses on single gene mutations in AP4M1.WES analyzes all coding regions of genes, whereas this test is targeted to AP4M1 only.

Frequently Asked Questions

What is the AP4M1 gene?
The AP4M1 gene provides instructions for making a protein involved in the adaptor protein complex-4, which plays a role in intracellular trafficking. Mutations in this gene are associated with a form of hereditary spastic paraplegia and microcephaly.
What is the cost of the AP4M1 gene test?
The test costs INR 20,000, which includes home sample collection and genetic counseling.
What sample is required for this test?
The sample can be blood (2-3 ml in EDTA tube), extracted DNA, or one drop of blood on an FTA card.
Do I need to fast before the test?
No, fasting is not required for this genetic test.
How long does it take to get the results?
The turnaround time is 3 to 4 weeks from the time the sample is received at the laboratory.
Is home sample collection available?
Yes, we offer free home sample collection for online bookings across major cities in India.
What does a positive result mean?
A positive result indicates the presence of a pathogenic variant in the AP4M1 gene, confirming the genetic cause of microcephaly.
What if the result is negative?
A negative result means no mutation was found in the AP4M1 gene, but other genetic causes may still be possible. Further testing may be recommended.
Can this test be used for prenatal diagnosis?
Yes, if the familial mutation is known, this test can be performed on prenatal samples such as amniotic fluid or chorionic villus sampling.
Is genetic counseling included?
Yes, a genetic counseling session is included to draw a pedigree chart and discuss the implications of the test.
Which cities is home sample collection available in?
Home sample collection is available in over 200 cities including Mumbai, Delhi, Bangalore, Hyderabad, Chennai, Kolkata, and many more.
Is this test covered by insurance?
Insurance coverage varies; we recommend checking with your insurance provider. We also offer a discounted price of INR 20,000.
Worried about the process? Our certified phlebotomists collect thousands of samples every month across India. The process takes under 5 minutes and is virtually painless. Questions? Message us on WhatsApp — we're here 7 days a week.

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We serve as a reference laboratory for hospitals and clinics across India. Send samples from your facility with same-day pickup, priority processing, and results delivered through our online portal. Competitive institutional pricing available.

LIMS Integration

Your Data Privacy

Your medical data is protected under Indian law.

Stored in India: All patient records are stored on servers located in India. No data is transferred outside the country.

DPDP Act Compliant: Under the Digital Personal Data Protection Act 2023, you can request deletion of your records at any time by contacting support.

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