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CDH15 Gene Mental retardation, autosomal dominant type 3 NGS Genetic Test

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CDH15 Gene Mental retardation, autosomal dominant type 3 NGS Genetic Test

Short Name: CDH15 NGS Genetic Test

Also known as: CDH15 Gene Mutation Analysis, MRD3 Genetic Test, Cadherin-15 Gene Sequencing, CDH15-Related Intellectual Disability NGS Test

CDH15 Gene Mental retardation, autosomal dominant type 3 NGS Genetic Test test available at DNA Labs India for ₹20,000. Uses Next-Generation Sequencing (NGS) on Blood, Saliva, Extracted DNA, or One drop Blood on FTA Card samples. Results in Reports are usually available within 3 to 4 weeks from the date the sample is received in the laboratory.. Free home collection in 300+ cities across India.

NGS Genetic Test🏠 Home Collection

🩺 Medically Reviewed By

Overview

The purpose of this NGS genetic test is to identify disease-causing variants in the CDH15 gene in individuals with features suggestive of autosomal dominant type 3 mental retardation. It assists in confirming the clinical diagnosis, establishing the genetic cause for the family, guiding recurrence risk assessment, and enabling reproductive counselling.

Test Code
4239
Price
₹20,000
Sample Type
Blood, Saliva, Extracted DNA, or One drop Blood on FTA Card
Result Time
Reports are usually available within 3 to 4 weeks from the date the sample is received in the laboratory.
Fasting Required
No
Method
Next-Generation Sequencing (NGS)
Step 1

Sample Collection

No fasting is required. Please carry any previous genetic reports, clinical history notes, and a list of medications if applicable. A pre-test genetic counselling session should be completed to draw a pedigree chart of affected family members.

Method: Venous blood draw; saliva collection; FTA card spot; extracted DNA submission

Step 2

Laboratory Analysis

For blood collection, a small volume of venous blood is drawn using an EDTA vial. For FTA card, one drop of blood is spotted on the card and allowed to dry. For saliva, patient provides specimen in the provided kit. No special pain or risk is involved.

Step 3

Report Delivery

No specific restrictions. Patient can resume normal activities. The sample will be transported in a temperature-controlled container to the laboratory for DNA extraction and sequencing.

Timeline: Reports are usually available within 3 to 4 weeks from the date the sample is received in the laboratory.

Patient Instructions

1
Before the Test:No fasting required; complete pre-test genetic counselling; submit family history and pedigree details.
2
During the Test:Sample collection takes approximately 5-10 minutes; NGS analysis occurs in the laboratory over 2-4 weeks.
3
After the Test:The report is released after clinical interpretation; a follow-up consultation with the referring physician or genetic counsellor is recommended.

About This Test

Who Should Get This Test

The purpose of this NGS genetic test is to identify disease-causing variants in the CDH15 gene in individuals with features suggestive of autosomal dominant type 3 mental retardation. It assists in confirming the clinical diagnosis, establishing the genetic cause for the family, guiding recurrence risk assessment, and enabling reproductive counselling.

How to Prepare

  • Pre-test genetic counselling is recommended before sample collection
  • Use an EDTA tube for blood collection if blood sample is requested
  • For FTA card, spot one drop of blood on the marked circles and air-dry completely
  • Label the sample with patient name and unique identifier
  • Do not send sample without the signed requisition form

Doctor's Notes

Reviewed by — MBBS, MD (Medical Genetics) · Reg. No. 8532

"In families with unexplained intellectual disability, targeted genetic testing can help establish the cause and guide recurrence risk counselling. This test is especially useful when CDH15-related MRD3 is suspected."

Last medically reviewed: September 7, 2026

Test Parameters & Specifications

Sample TypeBlood, Saliva, Extracted DNA, or One drop Blood on FTA Card
Sample Volume5 ml venous blood in EDTA tube; saliva as per kit; one drop on FTA card; extracted DNA as per NGS protocol
ContainerEDTA tube; FTA card; DNA vial; saliva kit
Collection MethodVenous blood draw; saliva collection; FTA card spot; extracted DNA submission

Sample Stability

Whole blood (EDTA) at room temperature
Whole blood (EDTA) at 2-8°C
FTA card at room temperature
Extracted DNA at -20°C
Sample Rejection Criteria:
  • Unlabelled or mislabelled sample
  • Severely hemolyzed or clotted blood sample
  • Insufficient sample volume
  • Sample transported after prolonged delay without cold chain
  • Evidence of leakage or contamination of the sample container

Understanding Your Results

The genetic test report will describe the CDH15 gene variants detected, if any, along with an interpretation based on American College of Medical Genetics and Genomics (ACMG) guidelines. The report should be reviewed with a clinical geneticist who can explain the implications for the patient and family members.
📊

Pathogenic variant detected

Confirms the diagnosis of CDH15-related autosomal dominant type 3 mental retardation. The variant is causative for the phenotype.

Action: Genetic counselling for family, predictive testing for at-risk relatives and clinical management.

📊

Likely pathogenic variant detected

Variant is highly likely to be disease-causing but additional evidence is needed to fully confirm pathogenicity.

Action: Segregation testing in affected family members and further clinical evaluation are recommended.

📊

Variant of uncertain significance (VUS)

A gene change was found, but its effect on protein function is not yet known. This cannot be used to confirm or exclude the diagnosis.

Action: Family segregation studies, functional analysis, or re-classification after future evidence is advised.

📊

No pathogenic variant detected

No clinically significant CDH15 variant was found. CDH15 is unlikely to be the cause of the individual's intellectual disability.

Action: Discuss broader testing options such as intellectual disability panel or chromosomal microarray.

⚠️ When to Consult a Doctor:

If the test detects a pathogenic or likely pathogenic variant, the patient and at-risk family members should consult a clinical geneticist for family testing, recurrence risk counselling and management planning. If symptoms persist despite a negative result, a broader intellectual disability panel or whole exome sequencing may be considered.

Limitations

  • This is a targeted CDH15 gene test and does not evaluate other genes associated with intellectual disability
  • Large structural rearrangements, deep intronic variants, or copy number changes involving CDH15 may not be reliably detected by standard NGS if not specifically covered
  • A variant of uncertain significance does not provide a definitive diagnosis without further family studies
  • A negative result does not exclude the possibility of intellectual disability due to other genetic or non-genetic causes

Risks & Considerations

  • Minor pain, bleeding or bruising at the blood draw site
  • Emotional stress from genetic test results
  • Potential for variant reclassification in the future

Interfering Factors

  • Recent blood transfusion or bone marrow transplant may alter genetic test results
  • Maternal cell contamination of blood or tissue samples can interfere with detection of variants
  • Poor DNA quality or quantity due to sample degradation, high temperature, or prolonged transport
  • Incomplete clinical or family history may limit interpretation of findings

Compare With Similar Tests

TestCDH15 Gene Mental retardation, autosomal dominant type 3 NGS Genetic TestTargeted CDH15 NGS TestIntellectual Disability NGS PanelWhole Exome Sequencing
ComparisonCDH15 Gene Mental retardation, autosomal dominant type 3 NGS Genetic Test

Frequently Asked Questions

What is the CDH15 gene?
CDH15 gene provides instructions for making cadherin-15, a cell adhesion protein involved in maintaining connections between brain neurons. Pathogenic variants in CDH15 can disrupt these connections and lead to autosomal dominant type 3 mental retardation.
What is autosomal dominant type 3 mental retardation?
It is a rare inherited form of intellectual disability caused by mutations in CDH15. As an autosomal dominant condition, one altered copy of the gene can cause the disorder. Symptoms may include intellectual disability, speech delay, behavioral issues and autism spectrum features.
Why is NGS used for this genetic test?
NGS allows the complete coding sequence and surrounding splice regions of CDH15 to be analysed with high sensitivity in a single assay. It can detect point mutations and small insertion/deletions in the gene, providing a reliable laboratory diagnosis.
Who should consider this test?
Individuals with unexplained intellectual disability, developmental delay, speech delay, or behavioural features suggestive of MRD3, especially when there is a family history of autosomal dominant mental retardation, may consider this test after clinical genetics consultation.
What sample is needed for the CDH15 NGS test?
The test can be performed on venous blood in an EDTA tube, saliva sample, extracted DNA, or one drop of blood spotted on an FTA card, depending on the laboratory requirement and patient convenience.
Is fasting required before sample collection?
No, fasting is not required for this genetic test. You can eat and drink normally before sample collection.
How many days will the CDH15 NGS test report take?
The turnaround time is 3 to 4 weeks from the date the sample is received in the laboratory.
What does a positive CDH15 test result mean?
A positive result means a pathogenic or likely pathogenic variant in CDH15 has been detected. This supports a diagnosis of autosomal dominant type 3 mental retardation and enables recurrence risk counselling for the family.
What does a negative CDH15 test result mean?
A negative result means no disease-causing variant was detected in CDH15. This reduces the likelihood that CDH15 is the cause, but other genetic and non-genetic causes still need to be explored.
What is the cost of the CDH15 NGS genetic test in India?
The test costs INR 20,000 at DNA Labs India. For online bookings, home sample collection is free in selected cities across India.
How can I book the CDH15 NGS genetic test?
You can book online through the DNA Labs India website or contact the lab directly. The booking team will coordinate sample collection and share the requisition and pre-test counselling details.
Will this test detect all causes of mental retardation?
No. This test is specific to CDH15 gene mutations. It will not detect other genes, chromosomal abnormalities, or non-genetic causes. A broader intellectual disability panel or whole exome sequencing may be recommended if CDH15 testing is negative.
Worried about the process? Our certified phlebotomists collect thousands of samples every month across India. The process takes under 5 minutes and is virtually painless. Questions? Message us on WhatsApp — we're here 7 days a week.

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