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COLQ Gene Endplate acetylcholinesterase deficiency NGS Genetic Test

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COLQ Gene Endplate acetylcholinesterase deficiency NGS Genetic Test

Short Name: COLQ Endplate AChE Deficiency NGS Test

Also known as: Endplate AChE Deficiency Genetic Testing, COLQ-Related Congenital Myasthenic Syndrome NGS Test, COLQ Gene Mutation Analysis

COLQ Gene Endplate acetylcholinesterase deficiency NGS Genetic Test test available at DNA Labs India for ₹20,000. Uses Next Generation Sequencing (NGS) on Blood or Extracted DNA or One drop Blood on FTA Card samples. Results in Reports are usually available within 3 to 4 weeks from sample receipt.. Free home collection in 300+ cities across India.

NGS Genetic Test🏠 Home Collection

🩺 Medically Reviewed By

Overview

The purpose of this test is to confirm or exclude a genetic cause of endplate acetylcholinesterase deficiency by identifying pathogenic variants in the COLQ gene. NGS methodology allows sequencing of all coding regions and splice sites in a single workflow. This test is useful in patients with suspected congenital myasthenic syndrome, particularly when electrophysiological studies or muscle biopsy suggest an endplate defect. The result helps clinicians tailor treatment and provides accurate recurrence risk information for families.

Test Code
4063
ICD Code
G70.2
Price
₹20,000
Sample Type
Blood or Extracted DNA or One drop Blood on FTA Card
Result Time
Reports are usually available within 3 to 4 weeks from sample receipt.
Fasting Required
No
Method
Next Generation Sequencing (NGS)
Step 1

Sample Collection

No special preparation or fasting is needed. A pre-test genetic counselling session is recommended to obtain family history, draw a pedigree chart, and explain the scope and limitations of the test.

Method: Venipuncture or FTA card blood spot

Step 2

Laboratory Analysis

A healthcare professional will collect blood in an EDTA vacutainer. Alternatively, a blood spot can be placed on an FTA card.

Step 3

Report Delivery

You may return to regular activities immediately. The sample is sent to the laboratory for DNA extraction and NGS analysis.

Timeline: Reports are usually available within 3 to 4 weeks from sample receipt.

Patient Instructions

1
Before the Test:No special preparation or fasting is needed. A pre-test genetic counselling session is recommended to obtain family history, draw a pedigree chart, and explain the scope and limitations of the test.
2
During the Test:A healthcare professional will collect blood in an EDTA vacutainer. Alternatively, a blood spot can be placed on an FTA card.
3
After the Test:You may return to regular activities immediately. The sample is sent to the laboratory for DNA extraction and NGS analysis.

About This Test

Who Should Get This Test

The purpose of this test is to confirm or exclude a genetic cause of endplate acetylcholinesterase deficiency by identifying pathogenic variants in the COLQ gene. NGS methodology allows sequencing of all coding regions and splice sites in a single workflow. This test is useful in patients with suspected congenital myasthenic syndrome, particularly when electrophysiological studies or muscle biopsy suggest an endplate defect. The result helps clinicians tailor treatment and provides accurate recurrence risk information for families.

How to Prepare

  • No fasting is required.
  • Genetic counselling and informed consent are advised.
  • Sample should be labelled correctly and accompanied by a test requisition form.

Doctor's Notes

Reviewed by — MBBS, MD (Medical Genetics) · Reg. No. 8532

"When the clinical picture and electrophysiological studies point to a COLQ-related neuromuscular junction defect, targeted NGS testing of the COLQ gene is a precise and cost-effective approach. A confirmed genetic diagnosis helps guide treatment and provides important information for reproductive planning and family counselling."

Last medically reviewed: September 7, 2026

Test Parameters & Specifications

Sample TypeBlood or Extracted DNA or One drop Blood on FTA Card
Sample VolumeAs per laboratory requirement
ContainerEDTA vacutainer / DNA extraction tube / FTA card
Collection MethodVenipuncture or FTA card blood spot

Sample Stability

Sample Rejection Criteria:
  • Hemolysed or clotted blood sample
  • Insufficient sample quantity
  • Incorrectly labelled sample
  • Sample received without consent or counselling documentation

Understanding Your Results

The test evaluates the COLQ gene for pathogenic variants. Results are correlated with clinical findings and reported by a clinical geneticist. The report includes details of any variant identified and its classification according to ACMG guidelines.
📊

Confirms the diagnosis of COLQ-related endplate acetylcholinesterase deficiency.

📊

Further family segregation studies or functional analysis may be required to clarify its role.

📊

Reduces the likelihood of COLQ-related disorder but does not completely exclude it.

⚠️ When to Consult a Doctor:

Consult a neurologist or clinical geneticist if you or your child has fatigable muscle weakness, respiratory or bulbar symptoms, or if the test result is abnormal.

Limitations

  • NGS may not detect large structural rearrangements, deep intronic changes, or promoter variants in COLQ.
  • This test does not evaluate other genes associated with congenital myasthenic syndrome.
  • A negative result does not completely eliminate the possibility of COLQ-related disease.

Risks & Considerations

  • No significant medical risks.
  • Mild discomfort or bruising at the venipuncture site.
  • Rare risk of fainting or dizziness during blood collection.

Interfering Factors

  • Allogeneic bone marrow transplant or recent blood transfusion may affect results in blood samples.
  • DNA degradation due to prolonged storage or exposure to heat.
  • Cross-contamination during sample collection or processing.

Compare With Similar Tests

TestCOLQ Gene Endplate acetylcholinesterase deficiency NGS Genetic Test
ComparisonCOLQ Gene Endplate acetylcholinesterase deficiency NGS Genetic Test

Frequently Asked Questions

What is tested in this COLQ NGS genetic test?
The test analyzes the COLQ gene for pathogenic variants that cause endplate acetylcholinesterase deficiency, a form of congenital myasthenic syndrome.
Who should take this test?
Individuals with fatigable muscle weakness, delayed motor milestones, respiratory or bulbar symptoms, and those with a family history suggestive of COLQ-related congenital myasthenic syndrome.
What type of sample is required?
Blood in EDTA, extracted DNA, or one drop of blood on an FTA card.
Is fasting required for this test?
No fasting is required for this genetic test.
How long do reports take?
Reports are delivered within 3 to 4 weeks from sample receipt.
What does a pathogenic variant result mean?
It confirms a genetic diagnosis of COLQ-related endplate acetylcholinesterase deficiency.
What does no pathogenic variant detected mean?
It indicates no disease-causing variant was identified in the COLQ gene. It reduces but does not fully exclude the possibility of COLQ-related disease.
Can some variants be reported as uncertain significance?
Yes. A variant of uncertain significance may be reported, and further family studies or functional analysis may be needed.
Does this test detect all genetic causes of congenital myasthenic syndrome?
No. It is specific to the COLQ gene. Other genes causing congenital myasthenic syndrome are not evaluated by this test.
Does the test require a genetic counselling session?
Yes, a pre-test genetic counselling session is recommended and is part of the test process.
Is home sample collection available?
Yes, DNA Labs India offers free home sample collection in many cities across India for this test.
What is the cost of the test?
The test costs INR 20000 and may vary with location and sample type.
Worried about the process? Our certified phlebotomists collect thousands of samples every month across India. The process takes under 5 minutes and is virtually painless. Questions? Message us on WhatsApp — we're here 7 days a week.

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