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DLG3 Gene Mental retardation, X-linked type 90 NGS Genetic Test

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DLG3 Gene Mental retardation, X-linked type 90 NGS Genetic Test

Short Name: DLG3 MRX90 NGS Test

Also known as: DLG3 NGS Test, MRX90 Genetic Test, SAP102 gene sequencing, X-linked intellectual disability type 90 test

DLG3 Gene Mental retardation, X-linked type 90 NGS Genetic Test test available at DNA Labs India for ₹20,000. Uses Next-Generation Sequencing (NGS), Sanger sequencing for variant confirmation on Blood or Extracted DNA or One Drop Blood on FTA Card samples. Results in The report is delivered online, by email or WhatsApp in approximately 3 to 4 weeks after the laboratory receives the sample.. Free home collection in 300+ cities across India.

NGS Genetic Test🏠 Home Collection

🩺 Medically Reviewed By

Overview

The purpose of this NGS genetic test is to detect disease-causing sequence variants in the DLG3 gene in individuals suspected to have X-linked mental retardation type 90. Establishing a molecular diagnosis can help confirm the clinical suspicion, define the recurrence risk for the family, and guide management and surveillance.

Test Code
4285
ICD Code
F79
Price
₹20,000
Sample Type
Blood or Extracted DNA or One Drop Blood on FTA Card
Result Time
The report is delivered online, by email or WhatsApp in approximately 3 to 4 weeks after the laboratory receives the sample.
Fasting Required
No
Method
Next-Generation Sequencing (NGS), Sanger sequencing for variant confirmation
Step 1

Sample Collection

No fasting required. A genetic counselling session is recommended to draw a pedigree chart of affected family members before the test.

Method: Blood collection by venepuncture or FTA card spotting

Step 2

Laboratory Analysis

A blood sample is collected by venepuncture, or a few drops of blood are placed on an FTA card, depending on the ordered method.

Step 3

Report Delivery

No special precautions are needed. The sample should be transported to the laboratory at room temperature.

Timeline: The report is delivered online, by email or WhatsApp in approximately 3 to 4 weeks after the laboratory receives the sample.

Patient Instructions

1
Before the Test:A genetic counselling session is recommended. The counsellor will draw a pedigree chart and explain the implications of the test.
2
During the Test:A small blood sample is collected from a vein in the arm, or a few drops of blood are applied to an FTA card. The procedure is quick and does not require fasting.
3
After the Test:You may resume normal activities immediately. The sample will be transported to the laboratory at room temperature for analysis.

About This Test

Who Should Get This Test

The purpose of this NGS genetic test is to detect disease-causing sequence variants in the DLG3 gene in individuals suspected to have X-linked mental retardation type 90. Establishing a molecular diagnosis can help confirm the clinical suspicion, define the recurrence risk for the family, and guide management and surveillance.

How to Prepare

  • No fasting or special preparation is needed
  • Blood sample should be collected in an EDTA vacutainer or spotted on an FTA card as provided
  • The sample should be labelled with the patient's name, date of birth and collection time
  • The sample should be sent to the laboratory at ambient temperature

Doctor's Notes

Reviewed by — MBBS, MD (General Medicine) · Reg. No. 8052

"A targeted DLG3 NGS test is particularly useful in families with an X-linked pattern of intellectual disability. A positive result provides a clear molecular diagnosis and allows accurate genetic counselling of at-risk relatives."

Last medically reviewed: September 7, 2026

Test Parameters & Specifications

Sample TypeBlood or Extracted DNA or One Drop Blood on FTA Card
Sample VolumeAs per laboratory protocol
ContainerEDTA vacutainer / DNA tube / FTA card
Collection MethodBlood collection by venepuncture or FTA card spotting

Sample Stability

Blood sample: Stable for up to 72 hours when stored at 2-8 degree Celsius
FTA card: Stable for several weeks at room temperature
Sample Rejection Criteria:
  • Haemolysed or clotted blood sample
  • Incorrectly labelled sample
  • Broken container or leaked sample
  • Sample received after prolonged transit without appropriate transport medium

Understanding Your Results

The clinical geneticist will correlate the test result with the individual's clinical features and family history.
📊

Pathogenic variant detected

Confirms DLG3-related X-linked mental retardation type 90 in a symptomatic individual or identifies carrier status in a female after counselling.

📊

Likely pathogenic variant detected

Likely causative and may be considered consistent with the diagnosis in the appropriate clinical context.

📊

No pathogenic variant detected

No clinically reportable DLG3 mutation was found; a genetic cause in another gene cannot be excluded.

📊

Variant of uncertain significance (VUS)

A DNA change was found, but its effect on health is not yet known; further studies are needed.

⚠️ When to Consult a Doctor:

You should consult your referring doctor or a clinical geneticist to discuss the test result, especially if it is positive, if a VUS is found, or if the result is negative but clinical suspicion remains strong.

Limitations

  • This test is limited to variants in the DLG3 gene and will not detect mutations in other genes
  • NGS may not detect large deletions, duplications, repeat expansions or methylation changes
  • A variant of uncertain significance (VUS) may require additional family segregation studies
  • A negative result does not exclude a genetic or non-genetic cause of intellectual disability

Risks & Considerations

  • Minor pain or bruising at the needle site
  • Lightheadedness or dizziness during blood collection
  • Very small risk of infection at the puncture site

Interfering Factors

  • Recent allogeneic bone marrow transplant can confound genetic testing results
  • Sample contamination or DNA degradation can cause analysis failure
  • Mosaic variants may be present below the detection limit of NGS

Compare With Similar Tests

TestDLG3 Gene Mental retardation, X-linked type 90 NGS Genetic TestChromosomal Microarray (CMA)X-Linked Intellectual Disability PanelWhole Exome Sequencing
ComparisonDLG3 Gene Mental retardation, X-linked type 90 NGS Genetic Test

Frequently Asked Questions

What is the cost of the DLG3 gene mental retardation type 90 NGS genetic test in India?
The cost at DNA Labs India is INR 20000 (Rs 20000.0). Online bookings include free home sample collection in many cities across India.
What does the DLG3 NGS genetic test detect?
It detects sequence mutations or variants in the DLG3 gene that can cause X-linked mental retardation type 90 (MRX90).
Who should get this test?
It is mainly considered for males with unexplained intellectual disability, speech delay, behavioural problems, seizures, or a family history suggesting X-linked inheritance. Female carriers may also choose testing after genetic counselling.
What is X-linked mental retardation type 90?
It is a rare genetic form of intellectual disability caused by mutations in DLG3 on the X chromosome. Symptoms can include cognitive impairment, speech and language delays, behavioural issues, seizures, and motor coordination problems.
What type of sample is needed?
The test can be performed on a blood sample, extracted DNA, or one drop of blood placed on an FTA card.
Is fasting required for this genetic test?
No, fasting is not required. You can give your sample at any time of the day.
How long does the report take?
Reports are generally ready within 3 to 4 weeks after the sample reaches the laboratory.
Can this test detect all genetic causes of intellectual disability?
No, this test only analyses the DLG3 gene. Other genes and conditions require separate genetic tests, panels, or chromosomal microarray.
What does a negative DLG3 result mean?
A negative result means no disease-causing sequence variant was found in the DLG3 gene, but it does not completely rule out a genetic cause elsewhere.
Is genetic counselling included with the test?
DNA Labs India recommends a genetic counselling session before the test to draw a family pedigree and discuss inheritance and test implications. This is part of the test workflow.
Will insurance cover the cost of this test?
Coverage depends on the insurance policy. At present, this genetic test may not be covered by most Indian insurance schemes, so it is advisable to confirm with your insurer.
What should I do after I receive the report?
Discuss the report with your referring doctor and a clinical geneticist, particularly if a pathogenic variant is found. They can explain the diagnosis, recurrence risk, and management options.
Worried about the process? Our certified phlebotomists collect thousands of samples every month across India. The process takes under 5 minutes and is virtually painless. Questions? Message us on WhatsApp — we're here 7 days a week.

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