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DNA Labs India

HPRT1 Gene Lesch-Nyham syndrome NGS Genetic Test

DNA Labs India | ISO 9001:2015 Certified

HPRT1 Gene Lesch-Nyham syndrome NGS Genetic Test

Short Name: HPRT1 NGS Genetic Test

Also known as: HPRT1 Gene Mutation Analysis, Lesch-Nyhan Syndrome Genetic Test, Hypoxanthine-Guanine Phosphoribosyltransferase Deficiency Test

HPRT1 Gene Lesch-Nyham syndrome NGS Genetic Test test available at DNA Labs India for ₹20,000. Uses Next Generation Sequencing (NGS) on Blood or Extracted DNA or One drop Blood on FTA Card samples. Results in Reports are available in 3 to 4 weeks after the laboratory receives the sample.. Free home collection in 300+ cities across India.

NGS Genetic Test🏠 Home Collection

🩺 Medically Reviewed By

Overview

The purpose of this test is to detect pathogenic variants in the HPRT1 gene, confirm a clinical diagnosis of Lesch-Nyhan syndrome, guide management, and identify carriers for reproductive planning.

Test Code
4193
ICD Code
E79.1
Price
₹20,000
Sample Type
Blood or Extracted DNA or One drop Blood on FTA Card
Result Time
Reports are available in 3 to 4 weeks after the laboratory receives the sample.
Fasting Required
No
Method
Next Generation Sequencing (NGS)
Step 1

Sample Collection

No special preparation such as fasting is required. A genetic counseling session is recommended before testing.

Method: Venipuncture, finger-prick blood spot, or submitted DNA sample

Step 2

Laboratory Analysis

A blood sample is collected from a vein, or a single drop of blood is placed on an FTA card for drying.

Step 3

Report Delivery

You may return to normal activities immediately.

Timeline: Reports are available in 3 to 4 weeks after the laboratory receives the sample.

Patient Instructions

1
Before the Test:No special preparation. Genetic counseling session is recommended.
2
During the Test:Sample collection is quick and minimally invasive.
3
After the Test:No restrictions. Await report delivery in 3 to 4 weeks.

About This Test

Who Should Get This Test

The purpose of this test is to detect pathogenic variants in the HPRT1 gene, confirm a clinical diagnosis of Lesch-Nyhan syndrome, guide management, and identify carriers for reproductive planning.

How to Prepare

  • Blood sample: 2-5 mL of venous blood in an EDTA tube.
  • FTA card: One drop of blood on the indicated circles, allowed to air dry.
  • Extracted DNA: Submit at least 1 microgram of high-quality DNA in a screw-capped tube.

Doctor's Notes

Reviewed by — MBBS, MD (Medical Genetics) · Reg. No. 8532

"Genetic counseling and prenatal diagnosis are essential for families with HPRT1 mutations. Confirm the clinical diagnosis with NGS before planning treatment and family screening."

Last medically reviewed: September 7, 2026

Test Parameters & Specifications

Sample TypeBlood or Extracted DNA or One drop Blood on FTA Card
ContainerEDTA tube, FTA card, or sterile vial for DNA
Collection MethodVenipuncture, finger-prick blood spot, or submitted DNA sample

Sample Stability

Blood sample: 7 days at room temperature, 14 days at 4°C
FTA card: Stable for months at room temperature
Extracted DNA: Stable for months at -20°C
Sample Rejection Criteria:
  • Clotted blood sample
  • Hemolysed sample
  • Insufficient quantity
  • Wrong anticoagulant (heparin can inhibit PCR)

Understanding Your Results

The HPRT1 gene NGS test provides sequence information of the HPRT1 gene. Identified variants are classified according to ACMG guidelines.
📊

Positive

Pathogenic variant detected - confirms diagnosis of Lesch-Nyhan syndrome

📊

Negative

No pathogenic variant detected - reduces likelihood of genetic diagnosis but does not exclude it

📊

Variant of Uncertain Significance (VUS)

Additional studies may be needed to determine clinical significance

⚠️ When to Consult a Doctor:

If the result is positive, consult a clinical geneticist and a neurologist for management and family screening. If negative but clinical suspicion persists, request HPRT enzyme activity testing.

Limitations

  • This test detects variants in coding regions and intron-exon boundaries. Large deletions, duplications, deep intronic mutations, or variants in regulatory regions may not be identified.
  • A negative result does not completely rule out Lesch-Nyhan syndrome; if clinical suspicion remains high, enzyme assay or further comprehensive testing should be considered.

Risks & Considerations

  • Minor bruising or bleeding at the blood collection site
  • Rare vasovagal reaction (dizziness)

Interfering Factors

  • Contamination of sample with maternal cells (for prenatal samples)
  • Insufficient DNA concentration
  • Degraded DNA from inappropriate transport or storage

Frequently Asked Questions

What is the HPRT1 NGS genetic test for Lesch-Nyhan syndrome?
This test uses next-generation sequencing to analyze the HPRT1 gene for mutations that cause Lesch-Nyhan syndrome, a rare X-linked recessive disorder affecting purine metabolism.
How much does the test cost at DNA Labs India?
The test costs Rs 20000 inclusive of home sample collection and genetic counseling session.
What type of sample is required?
You can provide a blood sample, an extracted DNA sample, or a single drop of blood on an FTA card.
Do I need to fast before the test?
No, fasting is not required for this genetic test.
How long will the reports take?
Reports are typically delivered within 3 to 4 weeks after sample collection.
What does a positive test result indicate?
A positive result means a pathogenic variant in the HPRT1 gene has been detected, confirming the diagnosis of Lesch-Nyhan syndrome in an individual with clinical features.
What does a negative test result mean?
A negative result means no pathogenic variant was identified in the tested regions. However, it does not completely rule out Lesch-Nyhan syndrome; further testing such as enzyme assay may be recommended.
Is genetic counseling necessary before the test?
Yes, genetic counseling is recommended to review family history, draw a pedigree chart, and discuss the implications of the test result.
Will I receive raw data files with the report?
Yes, DNA Labs India provides raw data files including FASTQ and VCF files along with the clinical report.
Can this test be done for prenatal diagnosis?
Yes, prenatal testing is possible using appropriate fetal samples after genetic counseling. A sample such as amniotic fluid or chorionic villus is required.
Is home sample collection available?
Yes, free home sample collection is available in over 250 cities across India for online bookings.
Who should consider this test?
This test is recommended for individuals with symptoms suspicious of Lesch-Nyhan syndrome, families with a known HPRT1 mutation, and at-risk females for carrier testing.
Worried about the process? Our certified phlebotomists collect thousands of samples every month across India. The process takes under 5 minutes and is virtually painless. Questions? Message us on WhatsApp — we're here 7 days a week.

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