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DNA Labs India

KCNC1 Gene Epilepsy, progressive myoclonic type 7 NGS Genetic Test

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KCNC1 Gene Epilepsy, progressive myoclonic type 7 NGS Genetic Test

Short Name: KCNC1 Gene Epilepsy NGS Test

Also known as: Progressive Myoclonic Epilepsy Type 7, EPM7, KCNC1-related epilepsy

KCNC1 Gene Epilepsy, progressive myoclonic type 7 NGS Genetic Test test available at DNA Labs India for ₹20,000. Uses Next Generation Sequencing (NGS), Bioinformatics variant analysis on Blood or Extracted DNA or One drop Blood on FTA Card samples. Results in Reports are issued within 3 to 4 weeks from the date of sample receipt.. Free home collection in 300+ cities across India.

NeurologyAll ages, with symptom onset usually in childhood or adolescence🏠 Home Collection

🩺 Medically Reviewed By

Overview

The purpose of this NGS genetic test is to identify disease-causing variants in the KCNC1 gene in symptomatic individuals, thereby enabling early diagnosis, appropriate medical management, and genetic counselling for families affected by progressive myoclonic epilepsy type 7.

Test Code
4091
Price
₹20,000
Sample Type
Blood or Extracted DNA or One drop Blood on FTA Card
Result Time
Reports are issued within 3 to 4 weeks from the date of sample receipt.
Fasting Required
No
Method
Next Generation Sequencing (NGS), Bioinformatics variant analysis
Step 1

Sample Collection

No fasting is required. Patients should bring previous medical records, seizure history, and any prior genetic testing reports. A genetic counselling session may be performed to draw a pedigree chart of family members affected with KCNC1-related epilepsy.

Method: Venous blood draw or dried blood spot on FTA card

Step 2

Laboratory Analysis

A trained phlebotomist will collect the sample using sterile techniques. For FTA card collection, one drop of blood is applied onto the marked area and allowed to dry completely.

Step 3

Report Delivery

You may resume normal activities immediately after sample collection. The sample will be transported to the laboratory at the recommended temperature and processed. Reports will be shared within 3 to 4 weeks.

Timeline: Reports are issued within 3 to 4 weeks from the date of sample receipt.

Patient Instructions

1
Before the Test:No special preparation is needed. Please carry previous medical records, seizure history, and any prior genetic testing results.
2
During the Test:A trained phlebotomist will collect a blood sample or, if using FTA card, a single drop of blood. The collection takes about 10 minutes.
3
After the Test:You can resume normal activities immediately. Your sample will be processed in the laboratory and results will be delivered in 3 to 4 weeks.

About This Test

Who Should Get This Test

The purpose of this NGS genetic test is to identify disease-causing variants in the KCNC1 gene in symptomatic individuals, thereby enabling early diagnosis, appropriate medical management, and genetic counselling for families affected by progressive myoclonic epilepsy type 7.

How to Prepare

  • Use whole blood in an EDTA tube, extracted DNA, or FTA card as advised by the referring clinician.
  • For blood collection, fill the EDTA vacutainer and mix gently to prevent clotting.
  • For FTA card, apply one drop of blood onto the marked circles and allow to air dry.
  • Label the sample with patient name, date of birth, and collection date.
  • Transport the sample to DNA Labs India under appropriate temperature conditions.

Doctor's Notes

Reviewed by — MBBS, MD (Medical Genetics) · Reg. No. 8532

"Early genetic diagnosis of KCNC1 epilepsy enables a multidisciplinary approach involving neurology and clinical genetics, improves seizure management, and provides accurate recurrence-risk counselling for families."

Last medically reviewed: September 7, 2026

Test Parameters & Specifications

Sample TypeBlood or Extracted DNA or One drop Blood on FTA Card
Sample VolumeAs per DNA Labs India's specimen collection protocol
ContainerEDTA tube / FTA Card / DNA transport vial
Collection MethodVenous blood draw or dried blood spot on FTA card

Sample Stability

Whole blood in EDTA
FTA card blood spot
Extracted DNA
Sample Rejection Criteria:
  • Hemolyzed or clotted blood sample
  • Mislabelled or unlabelled specimen
  • Sample received in an incorrect container
  • Sample transported under extreme temperature conditions

Understanding Your Results

Result interpretation should be performed by a clinical geneticist or neurologist in the context of the patient's complete clinical picture and family history. Reported variants are classified according to international ACMG guidelines.
📊

No pathogenic or likely pathogenic variant was detected in the KCNC1 gene. This reduces but does not eliminate the possibility of KCNC1-related epilepsy.

Result type: Negative

📊

A pathogenic or likely pathogenic variant was detected in the KCNC1 gene. This confirms the genetic diagnosis and supports clinical management and family testing.

Result type: Positive

📊

A DNA variant of uncertain clinical significance was detected. Additional family segregation studies and clinical correlation are required before using this result for diagnosis.

Result type: Variant of Uncertain Significance (VUS)

⚠️ When to Consult a Doctor:

Consult a neurologist or clinical geneticist if you or a family member experiences progressive myoclonus, seizures, ataxia, or cognitive decline. Early genetic testing can guide management, avoid unnecessary investigations, and enable accurate family counselling.

Limitations

  • NGS may not detect large deletions, duplications, structural rearrangements, or deep intronic variants involving KCNC1.
  • Low-level somatic mosaicism may not be confidently detected by standard NGS.
  • A variant of uncertain significance may require family segregation studies and additional clinical correlation.
  • This test does not evaluate variants in other epilepsy-associated genes.
  • A negative result does not completely exclude a genetic cause of epilepsy.

Risks & Considerations

  • Minimal pain or discomfort at the blood collection site
  • Bruising or haematoma at the puncture site
  • Dizziness or light-headedness during or after blood collection

Interfering Factors

  • Poor sample quality or degraded DNA
  • Sample contamination
  • Low depth of coverage in specific gene regions
  • Bioinformatic challenges due to homologous sequences
  • Incorrect sample type or collection tube

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Frequently Asked Questions

What is KCNC1 gene epilepsy?
KCNC1 gene epilepsy is also known as progressive myoclonic epilepsy type 7 (EPM7). It is a rare genetic neurological disorder caused by pathogenic variants in the KCNC1 gene. Symptoms often begin in childhood or adolescence and include myoclonus, seizures, ataxia and cognitive decline.
What does the KCNC1 NGS genetic test detect?
The test uses next generation sequencing to detect pathogenic and likely pathogenic variants in the coding regions and splice sites of the KCNC1 gene. It is designed for patients suspected to have progressive myoclonic epilepsy type 7.
Who should undergo this test?
Individuals with myoclonus, seizures, ataxia, neurodevelopmental regression or visual impairment, especially when a progressive myoclonic epilepsy syndrome is suspected, may be considered for this test after clinical evaluation and genetic counselling.
What sample is required for the test?
The sample can be whole blood in an EDTA tube, extracted DNA, or one drop of blood on an FTA card. The laboratory should be contacted for the exact sample collection kit.
Is fasting required before the test?
No, fasting is not required. The test can be done at any time of the day.
How much does the KCNC1 NGS genetic test cost?
The test cost is INR 20000 at DNA Labs India. The price includes home sample collection for online bookings in selected cities, along with the clinical report and raw data files.
Will I receive raw data files with my report?
Yes. DNA Labs India provides raw data files, FASTQ and VCF files along with the conclusive clinical report. This transparency allows clinicians and genetic experts to re-analyse the data if needed.
How long will the report take?
The turnaround time is 3 to 4 weeks from the date of sample receipt. The report and raw data files are delivered through secure online channels.
Is home sample collection available?
Yes, DNA Labs India offers free home sample collection for online bookings of this test in major cities across India. The service covers all metros and many tier-2 and tier-3 cities.
Can this test rule out all genetic causes of epilepsy?
No. This test is only for KCNC1 gene epilepsy / progressive myoclonic epilepsy type 7. Epilepsy has many genetic causes, and broader epilepsy panels or whole exome sequencing may be considered if the clinical picture is not specific.
What does a negative result mean?
A negative result means no pathogenic or likely pathogenic variant was detected in the KCNC1 gene. However, it does not completely exclude a genetic cause, as variants in other genes or other types of variants may not be detected by this test.
Is genetic counselling recommended before testing?
Yes. Pre-test genetic counselling is recommended to discuss the benefits, limitations and implications of the test. A genetic counsellor will help draw a pedigree and assess family history before the test.
Worried about the process? Our certified phlebotomists collect thousands of samples every month across India. The process takes under 5 minutes and is virtually painless. Questions? Message us on WhatsApp — we're here 7 days a week.

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