Polyploid Plant Genome Reference Based Data Analysis-Illumina Test
Short Name: Polyploid Plant Genome Analysis
Also known as: Polyploid Plant Genome Sequencing Analysis, Illumina Plant Genome Analysis
Polyploid Plant Genome Reference Based Data Analysis-Illumina Test test available at DNA Labs India for ₹75,000. Uses Illumina Sequencing, Reference-based Genome Analysis on Extracted DNA samples. Results in Reports are delivered within 4 weeks from sample receipt.. Free home collection in 300+ cities across India.
🩺 Medically Reviewed By
Dr Pasupathy Arumugam
Consultant Pathologist · Reg: 21521
Last reviewed: September 7, 2026
Overview
The purpose of this analysis is to accurately identify and interpret genetic variations in polyploid plant genomes using Illumina sequencing data. It aids in understanding the genetic basis of traits, diagnosing genetic disorders, and supporting breeding programs.
- Test Code
- 6390
- CPT Code
- Not Applicable
- ICD Code
- Not Applicable
- Price
- ₹75,000
- Sample Type
- Extracted DNA
- Result Time
- Reports are delivered within 4 weeks from sample receipt.
- Fasting Required
- No
- Method
- Illumina Sequencing, Reference-based Genome Analysis
Sample Collection
Ensure DNA is extracted using a validated method. Provide sample details and species information.
Method: Sample shipment (dry ice)
Laboratory Analysis
Ship the DNA sample on dry ice to the laboratory. Include the requisition form.
Report Delivery
The laboratory will confirm sample receipt and initiate analysis. Results will be delivered in 4 weeks.
Timeline: Reports are delivered within 4 weeks from sample receipt.
Patient Instructions
About This Test
Who Should Get This Test
The purpose of this analysis is to accurately identify and interpret genetic variations in polyploid plant genomes using Illumina sequencing data. It aids in understanding the genetic basis of traits, diagnosing genetic disorders, and supporting breeding programs.
How to Prepare
- Use a sterile DNA LoBind tube.
- Label the tube with sample ID and date.
- Ship on dry ice to maintain DNA integrity.
- Include the completed requisition form.
Doctor's Notes
Reviewed by Dr Pasupathy Arumugam — MBBS, MD (Pathology) · Reg. No. 21521
"Polyploid genomes present unique analytical challenges; our reference-based approach ensures accurate variant calling and interpretation for research and breeding applications."
Last medically reviewed: September 7, 2026
Test Parameters & Specifications
Sample Stability
- DNA concentration < 10 ng/µL
- Degraded DNA (smear on gel)
- Sample without proper labeling
- Sample not shipped on dry ice
Understanding Your Results
Data Quality Metrics
Details: Includes total reads, mapping rate, and coverage depth to ensure reliability.
Variant Summary
Details: Lists the number of SNPs, indels, and structural variants detected.
Functional Annotation
Details: Variants are classified as synonymous, non-synonymous, frameshift, etc., with predicted effect on genes.
Recommendations
Details: Suggestions for further validation or breeding decisions based on findings.
This test is for research/agricultural purposes. Consult a plant geneticist or agronomist for interpretation and application.
Limitations
- ⚠Reference-based analysis requires a high-quality reference genome for the species.
- ⚠May not detect all structural variants in highly repetitive regions.
- ⚠Interpretation is limited to known genomic annotations.
- ⚠Not a diagnostic test for plant diseases; it is for research/breeding support.
Risks & Considerations
- ●No physical risks as this is a data analysis service.
- ●Potential for inconclusive results if data quality is poor.
Interfering Factors
- ●Poor DNA quality (degraded or contaminated)
- ●Low sequencing depth
- ●Incomplete reference genome
- ●Misalignment due to repetitive regions
- ●Sample mix-up
Compare With Similar Tests
| Test | Polyploid Plant Genome Reference Based Data Analysis-Illumina | |||
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| Comparison | Polyploid Plant Genome Reference Based Data Analysis-Illumina |
Frequently Asked Questions
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