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RNF39 Gene Hippocampal longterm potentiation, RFN39 related NGS Genetic Test

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RNF39 Gene Hippocampal longterm potentiation, RFN39 related NGS Genetic Test

Short Name: RNF39 NGS Test

Also known as: RNF39 LTP NGS Test, RNF39 gene mutation analysis, RNF39-related NGS genetic test

RNF39 Gene Hippocampal longterm potentiation, RFN39 related NGS Genetic Test test available at DNA Labs India for ₹20,000. Uses Next-Generation Sequencing (NGS) on Blood or Extracted DNA or One drop Blood on FTA Card samples. Results in Reports are usually generated within 3 to 4 weeks after sample receipt.. Free home collection in 300+ cities across India.

NGS Genetic Test🏠 Home Collection

🩺 Medically Reviewed By

Overview

The purpose of this test is to identify, in individuals with appropriate clinical symptoms or family history, pathogenic variants in RNF39 that may affect hippocampal long-term potentiation and contribute to neurological manifestations. NGS-based analysis helps clarify the genetic basis of the disorder and support clinical management, recurrence risk assessment and family screening.

Test Code
4120
Price
₹20,000
Sample Type
Blood or Extracted DNA or One drop Blood on FTA Card
Result Time
Reports are usually generated within 3 to 4 weeks after sample receipt.
Fasting Required
No
Method
Next-Generation Sequencing (NGS)
Step 1

Sample Collection

A genetic counselling session is necessary to draw a pedigree chart and document affected family members. No fasting or special preparation is required.

Method: Peripheral venipuncture or dried blood spot FTA card collection

Step 2

Laboratory Analysis

A peripheral blood sample is collected in an EDTA tube, or one drop of blood on an FTA card, or extracted DNA may be provided. The procedure takes just a few minutes.

Step 3

Report Delivery

The sample is labelled and transported to the laboratory at the recommended temperature. You can resume routine activities immediately.

Timeline: Reports are usually generated within 3 to 4 weeks after sample receipt.

Patient Instructions

1
Before the Test:Before the test, the referring physician and genetic counsellor will explain the purpose, benefits and limitations. A documented informed consent is required.
2
During the Test:In the laboratory, DNA is extracted, libraries are prepared and NGS sequencing is performed. Sequence data are aligned to a reference genome and variants are identified. Results are interpreted by a clinical geneticist.
3
After the Test:The clinical report and raw data files (FASTQ, VCF) are delivered securely. A genetic counselling consultation should be scheduled to understand the findings and next steps.

About This Test

Who Should Get This Test

The purpose of this test is to identify, in individuals with appropriate clinical symptoms or family history, pathogenic variants in RNF39 that may affect hippocampal long-term potentiation and contribute to neurological manifestations. NGS-based analysis helps clarify the genetic basis of the disorder and support clinical management, recurrence risk assessment and family screening.

How to Prepare

  • No fasting required before sample collection
  • Ensure correct patient identification and labelling
  • Complete the consent and clinical history form before sample collection
  • Genetic counselling session should ideally be completed before blood collection

Doctor's Notes

Reviewed by — MBBS, MD (Medical Genetics) · Reg. No. 8532

"This genetic test should be used in combination with neurological and psychiatric assessment. RNF39 variants may be of uncertain significance, and a multidisciplinary approach is important for accurate interpretation."

Last medically reviewed: September 7, 2026

Test Parameters & Specifications

Sample TypeBlood or Extracted DNA or One drop Blood on FTA Card
Sample Volume2-5 mL blood or 5 µL extracted DNA or one blood spot on FTA card
ContainerEDTA vacutainer / DNA elution tube / FTA card
Collection MethodPeripheral venipuncture or dried blood spot FTA card collection

Sample Stability

Whole blood in EDTA: 24 to 48 hours at 2-8°C
Extracted DNA: 6 months at -20°C
FTA card: 6 months at room temperature in a dry condition
Sample Rejection Criteria:
  • Clotted or haemolysed blood sample
  • Insufficient sample volume
  • Highly degraded DNA
  • Improperly labelled sample or missing consent

Understanding Your Results

Results are provided as a clinical report. Variant classification follows ACMG guidelines. Positive results do not confirm disease severity and require clinical correlation with neurological symptoms, family history and other investigations.
📊

Negative / No pathogenic variant detected

No clinically significant RNF39 variants were identified. If symptoms persist, other genetic, metabolic, or acquired causes should be considered.

📊

Pathogenic / Likely pathogenic variant detected

A clinically significant variant is present. This supports a genetic contribution to the clinical presentation. Family screening and genetic counselling are recommended.

📊

Variant of uncertain significance (VUS)

The detected variant has unknown clinical significance. Further segregation analysis, functional studies or reclassification may be needed.

⚠️ When to Consult a Doctor:

Consult a neurologist or clinical geneticist if you or a family member experience progressive memory loss, unexplained cognitive decline, or psychiatric symptoms such as hallucinations and delusions, especially with a family history of neurological disorders.

Limitations

  • NGS may not detect all structural, repeat-expansion or epigenetic variants.
  • Variants of uncertain significance may be reported; additional family segregation or functional studies may be required.
  • This test is not intended for prenatal diagnosis.
  • Test results should not be used as a sole diagnostic tool and require interpretation by a qualified clinician or genetic counsellor.

Risks & Considerations

  • Slight pain or bruising at the venepuncture site
  • Very low risk of local infection
  • No additional health risks from the genetic test itself

Interfering Factors

  • Very low DNA yield or highly degraded DNA
  • Sample contamination during collection
  • Insufficient sequencing coverage in certain GC-rich regions
  • Incorrect or incomplete clinical and family history

Compare With Similar Tests

TestRNF39 Gene Hippocampal longterm potentiation, RFN39 related NGS Genetic TestTargeted Sanger Sequencing for RNF39Whole Exome Sequencing (WES)Comprehensive Neurological Disorders NGS Panel
ComparisonRNF39 Gene Hippocampal longterm potentiation, RFN39 related NGS Genetic Test

Frequently Asked Questions

What is the RNF39 gene?
RNF39 is a protein-coding gene expressed mainly in the brain. It is believed to support hippocampal long-term potentiation, which is important for memory and learning.
What is long-term potentiation (LTP)?
LTP is a long-lasting increase in synaptic strength. It is considered a cellular model of memory formation and learning.
Can mutations in RNF39 cause Alzheimer's disease or schizophrenia?
Some research reports an association between RNF39 variants, Alzheimer's disease and schizophrenia, but the causal relationship and risk contribution are not completely established. Genetic test results should be interpreted with clinical history.
What type of genetic test is used?
Next-generation sequencing (NGS) is used to read multiple genes and detect variants in RNF39 and related genes in one test.
What sample is required for the RNF39 NGS test?
Blood or extracted DNA or a one-drop blood sample on an FTA card is accepted.
Do I need to fast before the test?
No, fasting is not required for this test.
How long will my reports take?
Reports are usually generated within 3 to 4 weeks.
What does a positive RNF39 mutation result mean?
A positive result means a pathogenic or likely pathogenic variant was found. This may warrant clinical correlation, further family testing and genetic counselling. It does not predict disease severity.
What does a negative RNF39 result mean?
A negative result means no clinically significant variants were detected in the analysed gene regions. If symptoms persist, other genetic or non-genetic causes should be considered.
Is home sample collection available?
Yes, DNA Labs India offers free home sample collection for online bookings of this test in many cities across India.
What is the cost of the RNF39 gene NGS genetic test?
The test costs INR 20,000 at DNA Labs India.
Should I have genetic counselling before or after this test?
Yes, genetic counselling is recommended before and after testing to understand the benefits, limitations, and implications of results. DNA Labs India includes a counselling session.
Worried about the process? Our certified phlebotomists collect thousands of samples every month across India. The process takes under 5 minutes and is virtually painless. Questions? Message us on WhatsApp — we're here 7 days a week.

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