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DNA Labs India

SPG11 Gene SPG11 NGS Genetic Test

DNA Labs India | ISO 9001:2015 Certified

SPG11 Gene SPG11 NGS Genetic Test

Short Name: SPG11 NGS Genetic Test

Also known as: SPG11 Gene Sequencing, Hereditary Spastic Paraplegia Genetic Test, Spatacsin Gene NGS Test

SPG11 Gene SPG11 NGS Genetic Test test available at DNA Labs India for ₹20,000. Uses Next-Generation Sequencing, Sanger Validation on Blood or Extracted DNA or One drop Blood on FTA Card samples. Results in Reports are issued within 3 to 4 weeks from sample receipt. Urgent samples may be expedited on request with additional charges.. Free home collection in 300+ cities across India.

NGS Gene Sequencing🏠 Home Collection

🩺 Medically Reviewed By

Overview

The purpose of this test is to detect pathogenic variants in the SPG11 gene, confirming the clinical diagnosis of hereditary spastic paraplegia type 11. It also helps identify carriers in at-risk families, enabling reproductive planning and prenatal diagnosis where applicable.

Test Code
4512
CPT Code
81408
ICD Code
G11.4
Price
₹20,000
Sample Type
Blood or Extracted DNA or One drop Blood on FTA Card
Result Time
Reports are issued within 3 to 4 weeks from sample receipt. Urgent samples may be expedited on request with additional charges.
Fasting Required
No
Method
Next-Generation Sequencing, Sanger Validation
Step 1

Sample Collection

No special preparation such as fasting is required. Please inform the laboratory of any prior blood transfusion or bone marrow transplant.

Method: Peripheral blood draw or buccal swab (FTA card)

Step 2

Laboratory Analysis

At the time of blood collection, proper sterile technique will be followed. For FTA card samples, the blood spots will be air-dried and packed safely.

Step 3

Report Delivery

The sample will be transported to the laboratory at ambient temperature. For DNA samples, ensure adequate concentration and volume as per lab instructions.

Timeline: Reports are issued within 3 to 4 weeks from sample receipt. Urgent samples may be expedited on request with additional charges.

About This Test

Who Should Get This Test

The purpose of this test is to detect pathogenic variants in the SPG11 gene, confirming the clinical diagnosis of hereditary spastic paraplegia type 11. It also helps identify carriers in at-risk families, enabling reproductive planning and prenatal diagnosis where applicable.

How to Prepare

  • EDTA blood sample must be collected in a sterile vacuum tube
  • Minimum blood volume: 2 mL
  • If sending extracted DNA, quality and quantity must be verified by the lab
  • FTA card sample: prepare at least 2 blood spots of adequate size, air-dried completely
  • Label the sample clearly with patient name and unique ID
  • Ship at ambient temperature (not frozen) unless otherwise instructed

Doctor's Notes

Reviewed by — MBBS, MD (Medical Genetics) · Reg. No. 8532

"Genetic testing for SPG11 is essential for accurate diagnosis of hereditary spastic paraplegia. Early identification allows for proactive management and informed reproductive decisions."

Last medically reviewed: September 7, 2026

Test Parameters & Specifications

Sample TypeBlood or Extracted DNA or One drop Blood on FTA Card
Sample Volume2 mL whole blood in EDTA tube or 5 µg extracted DNA
ContainerEDTA vacutainer / FTA card / DNA elution tube
Collection MethodPeripheral blood draw or buccal swab (FTA card)

Sample Stability

EDTA whole blood at room temperature
EDTA whole blood at 4°C
FTA card at room temperature
Extracted DNA at -20°C
Sample Rejection Criteria:
  • Samples with no labelling or mismatched requisition form
  • Haemolysed blood samples
  • Clotted blood (for EDTA tube)
  • Samples received after 7 days from collection (for EDTA blood)
  • Insufficient DNA quantity (<1 µg) for sequencing
  • Samples from recent blood transfusion recipient without documented donor DNA removal

Understanding Your Results

The genetic test report will be interpreted by clinical geneticists. Variants identified are classified according to ACMG guidelines. Linkage to published literature and genomic databases is also performed.
📊

Confirms diagnosis of SPG11-HSP. Suggests autosomal recessive inheritance; both alleles are usually mutated. Prenatal testing possible for family.

Action: Refer to neurologist for supportive management; genetic counselling for family members and reproductive options.

Result type: Positive (Pathogenic variant found)

📊

No disease-causing variant identified in SPG11 gene; does not exclude HSP caused by other genes or non-genetic causes.

Action: Consider broader HSP gene panel if clinical suspicion remains high.

Result type: Negative (No pathogenic variant found)

📊

A genetic variant was found, but its association with the disease is unclear. Family co-segregation and functional studies may help clarify.

Action: Testing of parents/affected siblings is recommended to assess co-segregation.

Result type: Variant of Uncertain Significance (VUS)

⚠️ When to Consult a Doctor:

Consult a neurologist or medical geneticist if you or a family member experience progressive stiffness and weakness in legs, walking difficulty, or have a known family history of hereditary spastic paraplegia. Genetic counselling before testing is strongly advised.

Limitations

  • This test detects mutations only in the SPG11 gene; other genes causing HSP are not analysed
  • The test cannot predict symptom severity or age of onset
  • Structural rearrangements or large deletions may not be detected by NGS alone
  • Genetic variants of uncertain significance (VUS) may be reported; further family testing may be required
  • Raw data is provided, but bioinformatics interpretation is limited to clinically validated pipeline

Risks & Considerations

  • Minimal risk of bruising or infection at the blood collection site
  • Psychological impact of genetic test results, especially before symptom onset
  • Risk of incidental findings not related to SPG11 (pre-test counselling recommended)

Interfering Factors

  • Blood transfusion within 3 weeks prior to testing may lead to donor DNA contamination
  • Bone marrow transplantation (chimerism) reduces the accuracy of genetic testing on blood
  • Poor DNA quality or quantity may cause sequencing failures
  • Large deletional rearrangements may not be detected by standard NGS panel
  • Variants in non-coding regulatory regions may not be captured

Compare With Similar Tests

TestSPG11 Gene SPG11 NGS Genetic TestSPG11 Gene Sanger SequencingHereditary Spastic Paraplegia NGS Panel
ComparisonSPG11 Gene SPG11 NGS Genetic Test

Frequently Asked Questions

What is the SPG11 gene NGS genetic test?
It is a Next-Generation Sequencing test that analyses the SPG11 gene for mutations that cause hereditary spastic paraplegia type 11. It provides a comprehensive molecular diagnosis.
When is this test recommended?
It is recommended for individuals who show symptoms of HSP, such as progressive leg stiffness, weakness, difficulty walking, or if they have a family history of SPG11-associated HSP.
What is the cost of the SPG11 gene test at DNA Labs India?
The test is offered at a discounted price of INR 20,000, which includes home sample collection and a comprehensive report with raw data files.
What type of sample is required?
You can give a blood sample in an EDTA tube, extracted DNA, or a few drops of blood on an FTA card. Home collection is available at no extra cost.
Is fasting required before the test?
No, fasting is not required for this genetic test.
How long does the test take to report?
The turnaround time is 3 to 4 weeks from the date of sample receipt.
Will I get raw data files?
Yes, DNA Labs India is the only lab that shares FASTQ, VCF, and BAM raw data files along with the clinical test report.
Can this test detect all forms of hereditary spastic paraplegia?
No, this test specifically detects mutations in the SPG11 gene. Other genes causing HSP would require a broader panel.
How are genetic test results interpreted?
The report is interpreted by clinical geneticists following ACMG guidelines. Variants are classified as pathogenic, likely pathogenic, or variants of uncertain significance.
Is this test suitable for prenatal diagnosis?
Prenatal diagnosis is possible using fetal DNA, but it requires prior confirmation of the mutation in the family. A dedicated prenatal counselling session is mandatory.
Does DNA Labs India offer genetic counselling?
Yes, pre-test and post-test genetic counselling is available. It is recommended to draw a pedigree chart of affected family members before testing.
Are there any hidden charges for home sample collection?
No, the price of INR 20,000 includes free home sample collection. There are no extra charges for most metro and non-metro cities.
Worried about the process? Our certified phlebotomists collect thousands of samples every month across India. The process takes under 5 minutes and is virtually painless. Questions? Message us on WhatsApp — we're here 7 days a week.

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