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VPS13A Gene Choreoacanthocytosis NGS Genetic Test

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VPS13A Gene Choreoacanthocytosis NGS Genetic Test

Short Name: VPS13A Gene ChAc NGS Test

Also known as: VPS13A Gene Sequencing, Choreoacanthocytosis Genetic Test, ChAc NGS Test, Neuroacanthocytosis Gene Test

VPS13A Gene Choreoacanthocytosis NGS Genetic Test test available at DNA Labs India for ₹20,000. Uses Next Generation Sequencing (NGS) on Blood or Extracted DNA or One drop Blood on FTA Card samples. Results in 3 to 4 weeks after sample receipt. Free home collection in 300+ cities across India.

NGS Genetic TestAll Ages🏠 Home Collection

🩺 Medically Reviewed By

Overview

The purpose of this NGS genetic test is to detect mutations in the VPS13A gene that cause choreoacanthocytosis. It can confirm a clinical suspicion of ChAc, provide a molecular diagnosis for affected individuals, help identify carriers in at-risk family members, and support pre-test and post-test genetic counseling.

Test Code
3954
Price
₹20,000
Sample Type
Blood or Extracted DNA or One drop Blood on FTA Card
Result Time
3 to 4 weeks after sample receipt
Fasting Required
No
Method
Next Generation Sequencing (NGS)
Step 1

Sample Collection

No fasting or special preparation is required. The patient or referring doctor should provide relevant clinical history and neurological assessment details. Genetic counseling before the test is recommended to understand the implications of possible results.

Method: Peripheral blood collection / FTA card spot / DNA sample submission

Step 2

Laboratory Analysis

A trained phlebotomist will collect a small blood sample. If an FTA card is used, one drop of blood is placed on the card and allowed to air dry. For an extracted DNA sample, the participant should follow the laboratory's submission instructions.

Step 3

Report Delivery

After collection, the sample should be labeled properly and transported to the laboratory as per instructions. The patient can resume normal daily activities immediately. The report is usually available in 3 to 4 weeks.

Timeline: 3 to 4 weeks after sample receipt

Patient Instructions

1
Before the Test:No fasting is required. A pre-test genetic counseling session is recommended to review family history, inheritance, and possible outcomes. The patient's clinical notes should be provided to the laboratory.
2
During the Test:A blood sample is collected or an existing DNA sample is submitted. For FTA card samples, one drop of blood is placed on the card and air dried. The sample is then sent to the NGS laboratory for VPS13A gene analysis.
3
After the Test:The result is usually available in 3 to 4 weeks. Post-test genetic counseling is advised to discuss the clinical significance of the report, implications for family members, and reproductive options.

About This Test

Who Should Get This Test

The purpose of this NGS genetic test is to detect mutations in the VPS13A gene that cause choreoacanthocytosis. It can confirm a clinical suspicion of ChAc, provide a molecular diagnosis for affected individuals, help identify carriers in at-risk family members, and support pre-test and post-test genetic counseling.

How to Prepare

  • For whole blood, use an EDTA vacutainer and mix gently to avoid clotting
  • For FTA card, spot one drop of blood onto the marked circle and air dry completely before sealing
  • Label the sample with patient name, date of birth, and collection date
  • Include the completed test request form and clinical history
  • Transport the sample at ambient temperature unless otherwise instructed

Doctor's Notes

Reviewed by — MBBS, MD (Medical Genetics) · Reg. No. 8532

"If a VPS13A variant is confirmed, family cascade testing and reproductive options should be discussed. This test must be interpreted along with clinical examination and genetic counseling."

Last medically reviewed: September 7, 2026

Test Parameters & Specifications

Sample TypeBlood or Extracted DNA or One drop Blood on FTA Card
Sample VolumeOne drop blood for FTA card; blood volume as per lab for EDTA sample
ContainerEDTA vacutainer / FTA card / DNA sample tube
Collection MethodPeripheral blood collection / FTA card spot / DNA sample submission

Sample Stability

Whole blood in EDTA: stable for 24-48 hours at 2-8°C
FTA card: stable at room temperature for several weeks when kept dry
Extracted DNA: stable for months when stored at -20°C
Sample Rejection Criteria:
  • Clotted or haemolysed blood sample
  • Improperly labelled sample
  • Incomplete patient information or missing consent form
  • FTA card that is not completely dry or is sealed with moisture

Understanding Your Results

The report describes whether a pathogenic, likely pathogenic, or uncertain variant is identified in the VPS13A gene. Results should always be interpreted in the context of the patient's clinical presentation, family history, and laboratory findings.
📊

Confirms the molecular diagnosis of VPS13A-associated choreoacanthocytosis; affected individual.

📊

Strongly suggests a diagnosis; family studies and clinical correlation are recommended.

📊

Cannot confirm or exclude disease; further segregation or functional studies may be recommended.

📊

Negative result; does not exclude ChAc. Consider broader neuroacanthocytosis panel or other differential diagnoses.

⚠️ When to Consult a Doctor:

If the test identifies a pathogenic or likely pathogenic VPS13A variant, consult a clinical geneticist, neurologist, and genetic counselor for management and family planning. If symptoms persist despite a negative result, discuss additional diagnostic options with your doctor.

Limitations

  • NGS may not detect all mutation types, such as large genomic rearrangements, deep intronic variants, or promoter variants
  • A negative result does not completely exclude choreoacanthocytosis if clinical suspicion remains high
  • Variants of uncertain significance may require family segregation studies to determine pathogenicity
  • The test assesses only the VPS13A gene; other neuroacanthocytosis-related genes may need to be considered

Risks & Considerations

  • Pain, bruising, or slight bleeding at the venipuncture site
  • Rare risk of infection or hematoma with blood collection
  • Psychological stress related to genetic findings
  • Privacy and confidentiality concerns, though labs follow strict security protocols

Interfering Factors

  • Inadequate quality or quantity of extracted DNA may affect sequencing results
  • FTA card samples that are not properly dried may cause sample degradation
  • The test does not detect large deletions, duplications, or complex rearrangements unless specifically included in the analysis
  • Contamination of sample with other biological material may interfere with results

Compare With Similar Tests

TestVPS13A Gene Choreoacanthocytosis NGS Genetic TestSanger Sequencing (VPS13A)Neuroacanthocytosis NGS PanelClinical Exome Sequencing
ComparisonVPS13A Gene Choreoacanthocytosis NGS Genetic Test

Frequently Asked Questions

What is VPS13A gene choreoacanthocytosis NGS genetic test?
It is a next-generation sequencing test that analyzes the VPS13A gene to identify disease-causing mutations in individuals suspected to have choreoacanthocytosis.
What is choreoacanthocytosis?
Choreoacanthocytosis is a rare inherited neurodegenerative disorder characterized by movement problems, cognitive decline, psychiatric symptoms, peripheral neuropathy, and acanthocytes in the blood.
How is choreoacanthocytosis inherited?
Choreoacanthocytosis is inherited in an autosomal recessive pattern, meaning both copies of the VPS13A gene must have mutations for the disease to develop.
What sample is needed for this test?
The test can be done on whole blood in an EDTA tube, extracted DNA, or one drop of blood placed on an FTA card.
Do I need to fast before this test?
No, fasting is not required for the VPS13A gene NGS genetic test.
How long does the report take?
Reports are issued in 3 to 4 weeks after the sample is received by the laboratory.
Why is NGS preferred over Sanger sequencing for this test?
NGS allows complete sequencing of the VPS13A gene in a single efficient run, which is especially useful for rare genetic disorders with heterogeneous mutations.
Can this test be done for carrier testing?
Yes, in families with a known VPS13A mutation, targeted testing can identify carriers. Genetic counseling is recommended before carrier testing.
Are raw data files provided?
Yes, DNA Labs India provides raw data, FASTQ, and VCF files along with the conclusive clinical report for transparency.
What does a negative result mean?
A negative result means no pathogenic variant was detected in the VPS13A gene by this test, but it does not completely rule out choreoacanthocytosis if clinical suspicion remains high.
Does insurance cover this test?
Insurance coverage depends on the plan and medical indication. Please check with your insurance provider; DNA Labs India does not directly guarantee coverage.
How much does this test cost?
The VPS13A gene choreoacanthocytosis NGS genetic test costs Rs 20000 at DNA Labs India, with free home sample collection for online bookings in many cities across India.
Worried about the process? Our certified phlebotomists collect thousands of samples every month across India. The process takes under 5 minutes and is virtually painless. Questions? Message us on WhatsApp — we're here 7 days a week.

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