Fungal Genome Sequencing, De Novo Assembly and Annotation - Illumina Test
Short Name: Fungal Genome Sequencing
Also known as: Fungal Whole Genome Sequencing, De Novo Fungal Genome Assembly, Illumina Fungal Sequencing
Fungal Genome Sequencing, De Novo Assembly and Annotation - Illumina Test test available at DNA Labs India for ₹35,000. Uses Illumina Sequencing, De Novo Assembly, Genome Annotation on Extracted DNA samples. Results in Reports are delivered within 8 weeks from sample receipt.. Free home collection in 300+ cities across India.
🩺 Medically Reviewed By
Dr SHAILAJA RAGHUNATH MURDESHWAR
Consultant Physician · Reg: 8052
Last reviewed: September 7, 2026
Overview
The purpose of fungal genome sequencing is to obtain a complete and accurate genetic blueprint of a fungal pathogen. This enables precise species identification, detection of mutations associated with drug resistance, and understanding of evolutionary relationships. It also aids in the discovery of new virulence factors and potential therapeutic targets. For clinical cases, this information can guide the selection of effective antifungal agents, improving patient outcomes. In research, it contributes to the broader understanding of fungal biology and epidemiology.
- Test Code
- 6341
- CPT Code
- 81479
- ICD Code
- B49
- Price
- ₹35,000
- Sample Type
- Extracted DNA
- Result Time
- Reports are delivered within 8 weeks from sample receipt.
- Fasting Required
- No
- Method
- Illumina Sequencing, De Novo Assembly, Genome Annotation
Sample Collection
No special preparation required. Inform your physician about any ongoing antifungal therapy.
Method: Blood or tissue sample
Laboratory Analysis
Sample collection is performed by trained phlebotomists using sterile techniques.
Report Delivery
No specific post-collection precautions. Resume normal activities.
Timeline: Reports are delivered within 8 weeks from sample receipt.
Patient Instructions
About This Test
Who Should Get This Test
The purpose of fungal genome sequencing is to obtain a complete and accurate genetic blueprint of a fungal pathogen. This enables precise species identification, detection of mutations associated with drug resistance, and understanding of evolutionary relationships. It also aids in the discovery of new virulence factors and potential therapeutic targets. For clinical cases, this information can guide the selection of effective antifungal agents, improving patient outcomes. In research, it contributes to the broader understanding of fungal biology and epidemiology.
How to Prepare
- Ensure sample is collected in a sterile container
- Label the container with patient details
- Transport sample to the lab within 24 hours
Doctor's Notes
Reviewed by Dr SHAILAJA RAGHUNATH MURDESHWAR — MBBS, MD (General Medicine) · Reg. No. 8052
"Fungal genome sequencing is pivotal for identifying drug resistance markers and guiding targeted antifungal therapy, especially in immunocompromised patients."
Last medically reviewed: September 7, 2026
Test Parameters & Specifications
Sample Stability
- Hemolyzed blood samples
- Insufficient DNA quantity
- Improper labeling
- Sample not stored at appropriate temperature
Understanding Your Results
Indicates reliable assembly and accurate variant calling.
Suggests potential resistance to specific drugs, guiding alternative therapy.
May indicate unique virulence factors or species-specific traits.
Consult your physician if you have persistent fungal infections, are immunocompromised, or if you require guidance on antifungal therapy based on genomic results.
Limitations
- ⚠De novo assembly may have gaps in repetitive regions
- ⚠Annotation accuracy depends on reference databases
- ⚠Cannot detect epigenetic modifications
- ⚠Requires high-quality DNA for optimal results
Risks & Considerations
- ●No significant risks associated with sample collection
- ●Rare risk of bruising or infection at collection site
Interfering Factors
- ●Contamination with host DNA
- ●Degraded DNA samples
- ●Insufficient DNA quantity
- ●Presence of PCR inhibitors
Compare With Similar Tests
| Test | Fungal Genome Sequencing, De Novo Assembly and Annotation - Illumina | |||
|---|---|---|---|---|
| Comparison | Fungal Genome Sequencing, De Novo Assembly and Annotation - Illumina |
Frequently Asked Questions
What is fungal genome sequencing?
Why is de novo assembly important?
What is the cost of the test?
What sample is required?
How long does it take to get results?
Is home sample collection available?
Can this test detect antifungal resistance?
Is fasting required?
What is the difference between this and routine fungal culture?
Who should consider this test?
Are there any risks?
How do I book the test?
Related Tests
FCGR2B Gene Malaria, resistance to NGS Genetic Test
₹20,000ICAM1 Gene Malaria, cerebral, susceptibility to NGS Genetic Test
₹20,000ITS Sequencing
₹5,600IL12RB2 Gene Atypical Mycobacterial infection, IL12RB2 related NGS Genetic Test
₹20,000Parvovirus B19 Qualitative PCR Test
₹5,000Respiratory Panel 5 Test
₹4,500Reference Laboratory Services
We serve as a reference laboratory for hospitals and clinics across India. Send samples from your facility with same-day pickup, priority processing, and results delivered through our online portal. Competitive institutional pricing available.
Your Data Privacy
Your medical data is protected under Indian law.
✓ Stored in India: All patient records are stored on servers located in India. No data is transferred outside the country.
✓ DPDP Act Compliant: Under the Digital Personal Data Protection Act 2023, you can request deletion of your records at any time by contacting support.
Book Your Test
Enter your details and we'll connect you within 15 minutes.